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  5. Cpa|evm.model.tig00000093.66

Cpa|evm.model.tig00000093.66


Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM11-TRM112 tRNA guanosine-methyltransferase complex.TRM11 component


Gene families : OG0005490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000093.66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00096930 AtTRM11, TRM11,... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
AT3G26410 AtTRM11, TRM11 methyltransferases;nucleic acid binding 0.02 OrthoFinder output from all 47 species
Ehy_g03655 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.01 OrthoFinder output from all 47 species
Lfl_g01558 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.01 OrthoFinder output from all 47 species
Nbi_g07227 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.01 OrthoFinder output from all 47 species
Pir_g05138 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018673 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species
Sam_g50355 No alias component *(TRM11) of TRM11-TRM112 tRNA... 0.01 OrthoFinder output from all 47 species
Solyc10g047120.2.1 AtTRM11, TRM11,... component TRM11 of TRM11-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species
Tin_g09357 AtTRM11, TRM11 component *(TRM11) of TRM11-TRM112 tRNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA

No InterPro domains available for this sequence

No external refs found!