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  5. Cpa|evm.model.tig00000042.205

Cpa|evm.model.tig00000042.205


Description : RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.tRNA adenine-N6-methyltransferase


Gene families : OG0005801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005801_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000042.205
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g017344 No alias tRNA adenine-N6-methyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g060248 No alias tRNA adenine-N6-methyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g29278 No alias tRNA adenine-N6-methyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0078.g038207 No alias tRNA adenine-N6-methyltransferase & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020516.22 No alias RNA processing.RNA modification.tRNA... 0.04 OrthoFinder output from all 47 species
Solyc11g007750.3.1 Solyc11g007750 tRNA adenine-N6-methyltransferase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR023370 TrmO-like_N 108 223
No external refs found!