LOC_Os01g58420 (Os01g0797600)


Aliases : Os01g0797600

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein ?//CONTAINS one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g58420
Cluster HCCA cluster: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.01 Gene family
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.07 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.05 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.01 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.08 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.05 Gene family
GSVIVT01016684001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
GSVIVT01021060001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01032785001 No alias No description available 0.02 Gene family
GSVIVT01035098001 No alias No description available 0.04 Gene family
LOC_Os02g09650 Os02g0189500 No description available 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_179692g0020 No alias No description available 0.01 Gene family
MA_18403g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27309g0010 No alias No description available 0.01 Gene family
MA_42369g0010 No alias No description available 0.01 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.09 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.02 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.11 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc05g052040.1.1 Solyc05g052040.1 No description available 0.04 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.01 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.01 Gene family
Solyc11g012980.1.1 Solyc11g012980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.01 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.02 Gene family
Zm00001d005309 No alias No description available 0.03 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.01 Gene family
Zm00001d037941 GRMZM2G085964 No description available 0.05 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.01 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d049903 GRMZM2G060206 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d052365 GRMZM2G060465 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 32 82
No external refs found!