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Heatmap: Cluster_1 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
Pnu_g00172 (KIWI)
 -0.16 -0.37 0.64 -0.38
-1.59 -1.51 1.58 -1.56
-0.4 -0.61 0.92 -0.54
Pnu_g01230 (ARP4)
 -0.28 -0.19 0.54 -0.24
-1.24 -1.37 1.45 -1.12
-0.36 -0.71 1.04 -0.86
-1.05 -0.89 1.28 -0.84
-4.22 -3.4 1.79 -1.34
-1.18 -1.36 1.39 -0.86
-0.17 -0.28 0.51 -0.21
-0.2 -0.22 0.49 -0.2
-0.33 -0.44 0.81 -0.5
-0.38 -0.37 0.79 -0.46
-0.34 -0.23 0.55 -0.16
-0.88 -0.65 1.08 -0.52
-0.6 -1.05 1.23 -0.96
Pnu_g03502 (PUB13)
 -0.76 -0.34 0.89 -0.39
-1.37 -0.95 1.27 -0.54
Pnu_g03664 (MUB6)
 -0.41 -0.27 0.65 -0.24
-0.38 -0.79 1.11 -1.03
-0.74 -0.62 0.92 -0.22
-1.15 -1.25 1.39 -0.96
-1.37 -2.7 1.69 -2.16
-4.18 -3.47 1.89 -2.81
-0.45 -2.78 1.49 -1.68
-3.76 -3.36 1.83 -1.91
Pnu_g05690 (SIR3)
 -0.43 -0.35 0.73 -0.29
-0.47 -0.47 0.75 -0.19
-4.88 -3.06 1.82 -1.61
Pnu_g06300 (AtIPCS3)
 -0.52 -0.69 0.9 -0.29
-0.37 -0.33 0.62 -0.15
-0.39 -0.34 0.71 -0.3
Pnu_g08094 (CLS)
 -0.27 -0.45 0.71 -0.32
-1.99 -3.29 1.86 -5.57
-1.38 -1.1 1.34 -0.68
-0.35 -0.15 0.56 -0.25
-0.27 -0.2 0.46 -0.12
-1.04 -0.97 1.18 -0.45
-0.35 -0.17 0.53 -0.18
-0.67 -0.84 1.12 -0.66
-1.75 -1.9 1.76 -4.5
-0.98 -0.8 1.14 -0.47
Pnu_g10349 (HTB4)
 -0.34 -0.38 0.71 -0.3
-0.28 -0.53 0.87 -0.6
-0.16 -0.3 0.51 -0.2
Pnu_g10947 (HIS1-3)
 -0.65 -1.04 1.31 -1.33
-0.91 -0.91 1.17 -0.54
Pnu_g11060 (TSO2)
 -0.39 -0.8 0.93 -0.4
-0.47 -0.26 0.65 -0.2
-1.04 -0.47 1.03 -0.41
-0.22 -0.4 0.62 -0.25
-0.23 -0.25 0.62 -0.37
Pnu_g11616 (TPS5)
 -0.69 -0.75 1.08 -0.57
Pnu_g11979 (MUR4)
 -0.36 -0.24 0.64 -0.29
-0.21 -0.24 0.58 -0.33
-1.3 -1.22 1.35 -0.7
-0.49 -0.35 0.75 -0.29
Pnu_g13291 (UBA1)
 -0.17 -0.09 0.32 -0.12
-0.28 -0.27 0.53 -0.15
-0.17 -0.18 0.46 -0.23
-0.81 -1.25 1.32 -0.94
-0.42 -0.52 0.8 -0.3
-0.69 -0.65 1.03 -0.52
-4.09 -3.55 1.78 -1.21
-0.55 -0.7 0.87 -0.19
-0.25 -0.43 0.69 -0.32
-0.23 -0.4 0.65 -0.29
-1.64 -3.64 1.78 -2.63
-1.82 -0.49 1.26 -0.74
Pnu_g16646 (CTR1)
 -1.21 -0.95 1.26 -0.6
-2.6 -5.27 1.73 -1.04
-1.45 -1.06 1.31 -0.58
-0.61 -0.64 0.98 -0.46
-0.57 -0.53 0.89 -0.37
-0.45 -0.51 0.92 -0.58
Pnu_g17920 (UVR1)
 -0.81 -0.65 0.94 -0.19
-0.71 -0.5 0.92 -0.34
Pnu_g18240 (BGLU42)
 -3.41 -5.4 1.85 -1.84
-3.25 -4.05 1.62 -0.4
Pnu_g19207 (TTN7)
 -0.95 -0.65 1.02 -0.28
Pnu_g19492 (RPS6B)
 -0.35 -0.39 0.71 -0.28
- - 1.96 -3.1
-0.55 -0.32 0.86 -0.5
-0.35 -0.4 0.69 -0.23
-0.62 -0.68 0.96 -0.36
-4.45 -6.19 1.95 -3.5
-2.58 -3.35 1.68 -0.91
-6.58 -3.82 1.83 -1.46
-0.23 -0.19 0.52 -0.27
-0.36 -0.99 1.12 -0.87
-1.99 -1.44 1.48 -0.75
-0.89 - 1.79 -
-1.3 - 1.84 -5.54
-0.7 -0.71 1.05 -0.52
-1.58 - 1.87 -
-4.77 -5.12 1.89 -2.05
-2.45 -5.6 1.92 -6.62
-2.35 -3.52 1.64 -0.76
-3.19 -4.84 1.66 -0.53
- - 2.0 -
- - 2.0 -
-3.86 -6.4 1.96 -4.73
-2.35 -2.11 1.62 -0.98
-2.55 -3.21 1.87 -4.14
-1.93 -1.27 1.54 -1.28
-1.26 -2.34 1.69 -2.66
-0.93 -0.59 1.1 -0.59
-1.79 -3.77 1.74 -1.77
-0.63 -1.77 1.41 -1.33
-1.41 -0.8 1.34 -0.98
- - 2.0 -
-0.17 -0.77 0.94 -0.73
-0.57 -0.28 0.77 -0.31
-1.68 -1.32 1.41 -0.65
-1.4 -1.91 1.59 -1.51
-0.45 -0.28 0.71 -0.32
-2.13 - 1.89 -4.12
-0.61 -1.09 1.28 -1.14
-0.4 -1.16 1.25 -1.27
Pnu_g24317 (RIN4)
 -5.52 -2.95 1.82 -1.63
-3.81 - 1.95 -3.93
-1.04 - 1.81 -
Pnu_g24862 (SGP1)
 -2.88 -3.11 1.67 -0.81
Pnu_g25090 (MAMI)
 -1.12 -1.13 1.33 -0.8
Pnu_g25268 (NOF1)
 -0.55 -0.31 0.74 -0.25
-2.01 -5.06 1.88 -5.07
Pnu_g25414 (EMB2762)
 -0.18 -0.21 0.46 -0.19
Pnu_g25762 (SNP33)
 -2.93 -3.5 1.7 -0.93
-0.65 -1.04 1.35 -1.65
-2.69 -5.12 1.93 -
-3.59 -5.92 1.87 -1.96
- -5.05 1.99 -7.66
-1.62 -4.33 1.83 -3.77
-2.59 -2.2 1.66 -1.14
-1.1 -1.66 1.44 -0.97
-1.21 -1.84 1.62 -2.18
Pnu_g27303 (ABI1)
 -2.7 -4.43 1.72 -0.97
-1.63 -3.17 1.79 -3.14
Pnu_g27596 (ALA3)
 -0.99 -1.54 1.55 -2.14
-1.6 -1.51 1.5 -1.02
- -3.78 1.94 -3.28
Pnu_g27728 (SDE3)
 -0.19 -0.17 0.46 -0.22
-2.31 -2.15 1.66 -1.25
-1.69 -1.68 1.76 -
-0.89 - 1.78 -5.16
- - 2.0 -
- - 1.91 -1.98
-0.82 -0.84 1.36 -1.71
-0.85 -0.85 1.18 -0.69
-1.3 - 1.85 -
-2.11 -1.02 1.45 -0.88
-1.89 -2.11 1.58 -0.95
- - 2.0 -
-1.92 -1.12 1.41 -0.68
-2.34 -3.59 1.88 -4.42
- -3.35 1.93 -3.43
Pnu_g28773 (MSRB2)
 -1.15 -1.36 1.53 -1.9
-0.68 -3.98 1.69 -3.42
-1.46 -2.88 1.76 -3.08
-3.1 -6.44 1.83 -1.67
-0.64 -2.21 1.61 -3.55
-1.96 -2.78 1.74 -1.95
-1.0 -0.64 1.17 -0.73
-1.69 -1.87 1.59 -1.31
-1.05 -0.42 1.06 -0.56
-0.45 -0.38 0.82 -0.46
Pnu_g30222 (NIT4)
 -0.91 -1.09 1.36 -1.23
-0.65 - 1.75 -
-1.68 -1.9 1.53 -0.91
-1.22 -4.75 1.67 -1.54
Pnu_g31368 (LACS6)
 -0.68 -0.85 1.2 -0.93
-0.81 -0.92 1.06 -0.29
-2.83 - 1.95 -
Pnu_g32555 (SDG2)
 -0.29 -0.34 0.58 -0.16
-1.06 - 1.82 -
-0.42 -0.4 0.71 -0.21
-0.54 -0.25 0.76 -0.36
Pnu_g33759 (ERF9)
 -0.81 -1.27 1.48 -2.12
-0.92 -0.63 1.11 -0.58
Pnu_g33875 (ROS3)
 -0.37 -0.36 0.77 -0.43
-0.17 -0.25 0.44 -0.14
-0.41 -0.42 0.79 -0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.