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  5. Pnu_g33650

Pnu_g33650 (SIP2, AtSIP2)


Aliases : SIP2, AtSIP2

Description : alkaline alpha-galactosidase *(SIP2) & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g33650

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00147100 SIP1,... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00147150 SIP1,... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00147600 SIP1,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
Aev_g21107 SIP2, AtSIP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37879 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38472 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32731 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002784001 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
GSVIVT01004662001 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59430.2 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.02 OrthoFinder output from all 47 species
Msp_g05372 SIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16033 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11789 SIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031054_P001 DIN10, Zm00001e031054 galactinol-sucrose galactosyltransferase 0.04 OrthoFinder output from all 47 species
Zm00001e033100_P002 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 11 772
No external refs found!