Mp1g06200.1

Description : component TOUGH of DCL1-HYL1 miRNA biogenesis complex

Gene families : OG_01_0006076 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006076_tree ,
OG_02_0006644 (LandPlants) Phylogenetic Tree(s): OG_02_0006644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g06200.1
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AT5G23080	TGH	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.03	Archaeplastida
Cre13.g568700	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
MA_10431106g0020	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.02	Archaeplastida
Pp3c6_280V3.1	No alias	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.03	Archaeplastida
Smo80512	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.05	Archaeplastida
Solyc03g114410.3.1	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.02	Archaeplastida
Zm00001e036975_P003	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.04	Archaeplastida
AT5G23080	TGH	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.03	LandPlants
Pp3c6_280V3.1	No alias	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.02	LandPlants
Smo80512	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.05	LandPlants
Solyc03g114410.3.1	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.02	LandPlants
Zm00001e036975_P003	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.04	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000061	Surp	414	463
IPR011666	DUF1604	39	117

External Links

No external refs found!