LOC_Os01g49940 (Os01g0694300, Os01g0694400)


Aliases : Os01g0694300, Os01g0694400

Description : 27.1.3.16 RNA.processing.3 end processing.Symplekin


Gene families : OG_01_0002364 (Gene family) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g49940
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G27595 No alias CONTAINS InterPro DOMAIN/s: Symplekin tight junction... 0.03 Gene family
AT5G01400 ESP4 HEAT repeat-containing protein 0.08 Gene family
GSVIVT01009244001 No alias 27.1.3.16 RNA.processing.3 end processing.Symplekin 0.06 Gene family
GSVIVT01011157001 No alias 27.1.3.16 RNA.processing.3 end processing.Symplekin... 0.07 Gene family
MA_10426054g0010 No alias 27.1.3.16 RNA.processing.3 end processing.Symplekin 0.02 Gene family
MA_10430259g0010 No alias 27.1.3.16 RNA.processing.3 end processing.Symplekin 0.02 Gene family
Smo442688 PACid_15412472 27.1.3.16 RNA.processing.3 end processing.Symplekin... 0.03 Gene family
Solyc04g076910.3.1 Solyc04g076910.3 27.1.3.16 RNA.processing.3 end processing.Symplekin 0.04 Gene family
Solyc09g005330.3.1 Solyc09g005330.3 27.1.3.16 RNA.processing.3 end processing.Symplekin... 0.06 Gene family
Zm00001d022586 GRMZM2G086937,... 27.1.3.16 RNA.processing.3 end processing.Symplekin... 0.11 Gene family
Zm00001d043775 GRMZM2G466139 27.1.3.16 RNA.processing.3 end processing.Symplekin 0.12 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032460 Symplekin/Pta1_N 68 284
IPR022075 Symplekin_C 1052 1230
No external refs found!