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  5. Pnu_g32788

Pnu_g32788


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32788

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265700 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
AT2G03110 No alias RNA binding;nucleic acid binding 0.03 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05309 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Aob_g17355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68976.t1 Aspi01Gene68976 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.02 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G052900.1 Ceric.02G052900 not classified & original description: pacid=50583938... 0.04 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.02 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g35220.1 LOC_Os10g35220 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g00705 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Len_g02373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g13376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g15786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067210.3.1 Solyc02g067210 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g082980.3.1 Solyc03g082980 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc04g077060.3.1 Solyc04g077060 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g26299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010096_P002 Zm00001e010096 KH domain-containing protein HEN4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 120 171
IPR004088 KH_dom_type_1 223 291
IPR004088 KH_dom_type_1 390 442
IPR004088 KH_dom_type_1 476 544
No external refs found!