LOC_Os01g42350 (Os01g0609000)


Aliases : Os01g0609000

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g42350
Cluster HCCA cluster: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Gene family
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 Gene family
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.02 Gene family
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Gene family
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.02 Gene family
GSVIVT01016993001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01016998001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01035715001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os02g11760 Os02g0208300 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os08g43120 Os08g0544400 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_124091g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_12965g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_184352g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_949447g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Smo412699 PACid_15413246 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo412710 PACid_15413851 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo417266 PACid_15402308 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441717 PACid_15410131 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo96758 PACid_15410129 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Solyc02g081870.3.1 Solyc02g081870.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g065670.3.1 Solyc06g065670.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g019620.2.1 Solyc12g019620.2 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
Zm00001d009037 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d019951 GRMZM2G012465,... 34.16 transport.ABC transporters and multidrug... 0.18 Gene family
Zm00001d021647 GRMZM2G415529 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d044443 GRMZM2G143139 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 746 811
IPR003439 ABC_transporter-like 194 375
IPR003439 ABC_transporter-like 899 1051
IPR013525 ABC_2_trans 1197 1421
IPR013525 ABC_2_trans 529 741
IPR029481 ABC_trans_N 118 168
No external refs found!