Heatmap: Cluster_64 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
1.78 -1.18 -2.93 -
1.79 -1.83 -1.96 -
1.83 -2.76 -1.75 -
1.62 -0.49 -2.16 -
1.85 -2.32 -2.44 -
1.7 -1.7 -1.26 -5.69
1.79 -1.69 -2.24 -5.67
1.84 -1.82 -2.91 -
1.81 -1.56 -2.7 -
1.77 -1.21 - -2.64
1.59 -1.34 -0.76 -
1.81 -3.02 -1.56 -4.69
Pnu_g23842 (AVP1)
1.74 -2.69 -1.0 -
Pnu_g24795 (PAP3)
1.6 -1.22 -0.91 -5.98
1.76 -2.43 -1.57 -3.51
1.6 -1.44 -0.75 -
1.78 -3.18 -1.22 -5.26
2.0 - - -
1.91 -2.08 - -
Pnu_g29196 (ELIP)
1.95 - -2.97 -
1.73 -0.64 -4.29 -
1.96 -3.3 - -
2.0 - - -
1.61 -1.82 -0.92 -2.9
1.82 -1.5 -3.14 -
1.9 -4.18 -2.71 -4.2
2.0 - - -
Pnu_g30014 (LHCA6)
1.9 -1.87 - -
1.91 -3.93 -2.46 -
1.99 - - -5.5
1.76 -1.69 -1.74 -
2.0 - - -
1.66 -1.5 -1.03 -
1.81 -2.95 -1.5 -
1.81 -1.97 -2.66 -3.64
1.71 -1.22 -1.77 -
1.93 - -2.38 -
1.95 - -2.8 -
1.76 -1.71 -1.73 -
2.0 - -6.59 -
1.77 -1.1 -3.05 -
1.81 -2.97 -1.48 -
1.93 -3.04 -3.69 -
Pnu_g31043 (LHCA2)
1.74 -3.91 -0.78 -
Pnu_g31046 (PSBY)
1.7 -2.64 -0.74 -
Pnu_g31178 (RPS15A)
1.75 -2.73 -1.55 -2.85
Pnu_g31183 (PSBR)
1.69 -1.7 -1.11 -
Pnu_g31206 (PG2)
1.93 - -6.03 -2.55
Pnu_g31243 (CP12)
1.7 -2.01 -1.15 -4.62
1.81 -1.16 -4.13 -
Pnu_g31689 (PSAH2)
1.68 -1.55 -1.14 -
1.9 -2.33 -4.46 -6.42
1.79 -1.3 - -2.97
1.9 -2.16 - -4.24
Pnu_g32280 (PME2)
1.99 - -5.4 -7.45
1.91 -3.95 -2.46 -
1.94 - -2.59 -
1.71 -2.02 -1.05 -
1.89 -1.72 - -
2.0 - - -
1.83 -2.06 -2.35 -
1.57 -0.75 -1.16 -
Pnu_g32714 (NPQ4)
1.88 -4.81 -1.86 -
1.81 -0.99 - -
1.77 -3.27 -1.39 -3.26
1.91 -2.95 - -3.03
1.82 -2.03 -2.13 -
1.68 -2.66 -0.63 -
1.57 -1.14 -1.34 -2.41
1.76 -3.07 -1.02 -
1.64 -0.96 -1.44 -
1.98 -5.67 -4.61 -7.38
2.0 - - -
1.66 -2.95 -0.76 -2.97
2.0 - - -
1.82 -2.84 -1.61 -
1.79 -2.63 -1.4 -
1.9 - -1.94 -
Pnu_g33939 (FED A)
1.77 -1.82 -1.68 -
Pnu_g34073 (YCF6)
1.87 -1.5 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.