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  5. Pnu_g32465

Pnu_g32465


Description : not classified & original description: none


Gene families : OG0000078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32465

Target Alias Description ECC score Gene Family Method Actions
AT3G21000 No alias Gag-Pol-related retrotransposon family protein 0.04 OrthoFinder output from all 47 species
Adi_g034595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28209 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11928.t1 Aspi01Gene11928 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56095.t1 Aspi01Gene56095 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71917.t1 Aspi01Gene71917 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G025300.1 Ceric.15G025300 not classified & original description: pacid=50639896... 0.02 OrthoFinder output from all 47 species
Len_g16552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 2 65
No external refs found!