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ATMG00980 (RPSL2)


Aliases : RPSL2

Description : Ribosomal protein S12/S23 family protein


Gene families : OG0008286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATMG00980

Target Alias Description ECC score Gene Family Method Actions
Aev_g16236 No alias component *(uS12m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g13504 No alias component *(uS12m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Cba_g12837 No alias component *(uS12m) of small mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ceric.01G056200.1 Ceric.01G056200 not classified & original description: pacid=50592272... 0.04 OrthoFinder output from all 47 species
Ceric.01G057700.1 Ceric.01G057700 not classified & original description: pacid=50591871... 0.08 OrthoFinder output from all 47 species
Ceric.02G004700.1 Ceric.02G004700 not classified & original description: pacid=50584292... 0.07 OrthoFinder output from all 47 species
Ceric.05G043100.1 Ceric.05G043100 not classified & original description: pacid=50578321... 0.09 OrthoFinder output from all 47 species
Ceric.06G028400.1 Ceric.06G028400 not classified & original description: pacid=50620499... 0.08 OrthoFinder output from all 47 species
Ceric.18G054400.1 Ceric.18G054400 not classified & original description: pacid=50621895... 0.1 OrthoFinder output from all 47 species
Dcu_g49424 No alias component *(uS12m) of small mitoribosomal-subunit... 0.16 OrthoFinder output from all 47 species
GSVIVT01002752001 No alias Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris 0.05 OrthoFinder output from all 47 species
Gb_26488 No alias component mtRPS12 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os12g34062.1 LOC_Os12g34062 component mtRPS12 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Sam_g26624 No alias component *(uS12m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc00g500254.1.1 RPL20, Solyc00g500254 50S ribosomal protein L20, chloroplastic OS=Coffea... 0.05 OrthoFinder output from all 47 species
Spa_g48002 No alias component *(uS12m) of small mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005762 mitochondrial large ribosomal subunit TAS Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005763 mitochondrial small ribosomal subunit IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 12 123
No external refs found!