AT5G66700 (ATHB53, HB53, HB-8)


Aliases : ATHB53, HB53, HB-8

Description : homeobox 53


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G66700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00253290 ATHB13,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00085160 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AT3G01220 ATHB20, HB20 homeobox protein 20 0.01 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 OrthoFinder output from all 47 species
Adi_g016627 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g020723 HB51, ATHB51, LMI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082074 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g37063 ATHB22, HB22 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07957.t1 ATHB13, Aspi01Gene07957 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48842.t1 ATHB13, Aspi01Gene48842 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s3184.g114979 No alias not classified & original description: CDS=620-892 0.01 OrthoFinder output from all 47 species
Cba_g35111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14797 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07592 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020033001 ATHB13 RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
Gb_04698 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Gb_07209 ATHB3, HB-3, ATHB-3, HAT7 Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os10g23090.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
LOC_Os10g26500.1 ATHB13, LOC_Os10g26500 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Len_g19610 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03884 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10428916g0010 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
MA_132936g0010 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_441783g0010 AtHB23, HB23 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05256 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.12 OrthoFinder output from all 47 species
Nbi_g13843 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ore_g17073 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.01 OrthoFinder output from all 47 species
Ore_g32847 ATHB3, HB-3, ATHB-3, HAT7 regulatory protein *(LMI1) of floral meristem identity... 0.01 OrthoFinder output from all 47 species
Ore_g32848 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g32849 ATHB3, HB-3, ATHB-3, HAT7 regulatory protein *(LMI1) of floral meristem identity... 0.01 OrthoFinder output from all 47 species
Ore_g38546 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g40617 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pnu_g02929 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g06112 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Pnu_g15485 ATHB13 regulatory protein *(LMI1) of floral meristem identity... 0.04 OrthoFinder output from all 47 species
Pnu_g32938 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sam_g38769 No alias HD-ZIP I/II-type transcription factor & original... 0.1 OrthoFinder output from all 47 species
Smo81609 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
Solyc03g082550.3.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc07g062790.1.1 ATHB52, HB52,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Solyc09g008810.3.1 HB51, ATHB51,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Spa_g02959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38872 AtHB23, HB23 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g55691 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000532_P002 ATHB13, Zm00001e000532 transcription factor (HD-ZIP I/II) 0.08 OrthoFinder output from all 47 species
Zm00001e002803_P001 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e004824_P001 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
Zm00001e012829_P001 ATHB13, Zm00001e012829 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e038901_P001 ATHB13, Zm00001e038901 transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription ISS Interproscan
BP GO:0009733 response to auxin IEP Interproscan
BP GO:0048364 root development TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 72 125
No external refs found!