AT5G64570 (XYL4, ATBXL4)

Aliases : XYL4, ATBXL4

Description : beta-D-xylosidase 4

Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G64570

Target	Alias	Description	ECC score	Gene Family Method
Aev_g37060	XYL4, ATBXL4	EC_3.2 glycosylase & original description: none	0.01	OrthoFinder output from all 47 species
Als_g16446	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28516.t1	Aspi01Gene28516	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01035033001	ATBXL1, BXL1	Cell wall.pectin.rhamnogalacturonan I.modification and...	0.02	OrthoFinder output from all 47 species
LOC_Os01g19220.1	ATBXL2, BXL2,...	bifunctional alpha-L-arabinofuranosidase and...	0.02	OrthoFinder output from all 47 species
LOC_Os11g19210.1	LOC_Os11g19210	bifunctional alpha-L-arabinofuranosidase and...	0.02	OrthoFinder output from all 47 species
Ore_g26394	BXL3, BX3, XYL3,...	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27870	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g10735	No alias	EC_3.2 glycosylase & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g24375	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IDA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044347	cell wall polysaccharide catabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045493	xylan catabolic process	IDA	Interproscan
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097599	xylanase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:2000895	hemicellulose catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002772	Glyco_hydro_3_C	414	642
IPR001764	Glyco_hydro_3_N	126	368
IPR026891	Fn3-like	708	775

External Links

No external refs found!

AT5G64570 (XYL4, ATBXL4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation