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  5. AT5G62660

AT5G62660


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62660

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.08 OrthoFinder output from all 47 species
AT1G30930 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G33020 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G48060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.1 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G23160 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G15670 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 40 74
IPR013187 F-box-assoc_dom_typ3 245 369
No external refs found!