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  5. AT5G61620

AT5G61620


Description : myb-like transcription factor family protein


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G61620
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g106458 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ala_g12426 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025309 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G012200.1 Ceric.35G012200 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04723 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Len_g02187 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Len_g14512 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00718 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06884 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g06188 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025446_P001 Zm00001e025446 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0048830 adventitious root development IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 108 153
No external refs found!