AT5G60900 (RLK1)

Aliases : RLK1

Description : receptor-like protein kinase 1

Gene families : OG0002051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002051_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G60900
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00152630	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.08	OrthoFinder output from all 47 species
AMTR_s00006p00234620	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.07	OrthoFinder output from all 47 species
AMTR_s00010p00231070	evm_27.TU.AmTr_v1...	G-type lectin S-receptor-like serine/threonine-protein...	0.02	OrthoFinder output from all 47 species
AMTR_s00022p00191910	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00022p00192340	evm_27.TU.AmTr_v1...	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00193430	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00193900	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.05	OrthoFinder output from all 47 species
AMTR_s00022p00194170	RK1, ARK1,...	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00194460	CRK40,...	Enzyme classification.EC_2 transferases.EC_2.7...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00194720	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00195410	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.07	OrthoFinder output from all 47 species
AMTR_s00022p00195970	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.06	OrthoFinder output from all 47 species
AMTR_s00022p00196250	evm_27.TU.AmTr_v1...	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
AMTR_s00030p00110280	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.05	OrthoFinder output from all 47 species
AMTR_s00030p00114770	RK2, ARK2,...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00114790	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00115530	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.04	OrthoFinder output from all 47 species
AMTR_s00030p00116480	RLK1,...	G-type lectin S-receptor-like serine/threonine-protein...	0.08	OrthoFinder output from all 47 species
AMTR_s00030p00117770	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.06	OrthoFinder output from all 47 species
AMTR_s00074p00192300	evm_27.TU.AmTr_v1...	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
Ala_g21195	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene30795.t1	RLK4, Aspi01Gene30795	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene30798.t1	RLK4, Aspi01Gene30798	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001679001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.09	OrthoFinder output from all 47 species
GSVIVT01017953001	RLK4	G-type lectin S-receptor-like serine/threonine-protein...	0.11	OrthoFinder output from all 47 species
GSVIVT01025347001	SD2-5	G-type lectin S-receptor-like serine/threonine-protein...	0.11	OrthoFinder output from all 47 species
GSVIVT01025348001	RLK1	G-type lectin S-receptor-like serine/threonine-protein...	0.08	OrthoFinder output from all 47 species
GSVIVT01025349001	RK3, ARK3	G-type lectin S-receptor-like serine/threonine-protein...	0.16	OrthoFinder output from all 47 species
GSVIVT01026547001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
GSVIVT01026551001	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
Gb_05507	No alias	protein kinase (SD-2)	0.08	OrthoFinder output from all 47 species
Gb_05508	No alias	protein kinase (SD-2)	0.03	OrthoFinder output from all 47 species
Gb_05509	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
Gb_05510	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
Gb_05518	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.08	OrthoFinder output from all 47 species
Gb_08200	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.02	OrthoFinder output from all 47 species
Gb_08203	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
Gb_08204	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
Gb_13574	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.09	OrthoFinder output from all 47 species
Gb_13575	No alias	protein kinase (SD-2)	0.11	OrthoFinder output from all 47 species
Gb_13576	No alias	G-type lectin S-receptor-like serine/threonine-protein...	0.09	OrthoFinder output from all 47 species
LOC_Os01g73390.1	LOC_Os01g73390	G-type lectin S-receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
LOC_Os03g61310.1	LOC_Os03g61310	G-type lectin S-receptor-like serine/threonine-protein...	0.11	OrthoFinder output from all 47 species
LOC_Os04g12540.1	LOC_Os04g12540	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os04g12600.1	LOC_Os04g12600	G-type lectin S-receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
LOC_Os04g39930.1	LOC_Os04g39930	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os08g13420.1	LOC_Os08g13420	G-type lectin S-receptor-like serine/threonine-protein...	0.07	OrthoFinder output from all 47 species
Pnu_g10384	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g006520.3.1	Solyc01g006520	G-type lectin S-receptor-like serine/threonine-protein...	0.13	OrthoFinder output from all 47 species
Solyc01g006530.1.1	Solyc01g006530	G-type lectin S-receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
Solyc01g014530.2.1	Solyc01g014530	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc03g078360.1.1	Solyc03g078360	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
Solyc03g078370.1.1	Solyc03g078370	G-type lectin S-receptor-like serine/threonine-protein...	0.1	OrthoFinder output from all 47 species
Solyc09g075910.1.1	Solyc09g075910	G-type lectin S-receptor-like serine/threonine-protein...	0.11	OrthoFinder output from all 47 species
Solyc09g075920.1.1	Solyc09g075920	G-type lectin S-receptor-like serine/threonine-protein...	0.15	OrthoFinder output from all 47 species
Solyc11g005630.1.1	Solyc11g005630	G-type lectin S-receptor-like serine/threonine-protein...	0.16	OrthoFinder output from all 47 species
Zm00001e002823_P001	Zm00001e002823	G-type lectin S-receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
Zm00001e029830_P001	Zm00001e029830	G-type lectin S-receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030246	carbohydrate binding	ISS	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0006995	cellular response to nitrogen starvation	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009626	plant-type hypersensitive response	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034050	programmed cell death induced by symbiont	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043562	cellular response to nitrogen levels	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001480	Bulb-type_lectin_dom	83	188
IPR000719	Prot_kinase_dom	450	713
IPR003609	Pan_app	343	392

External Links

No external refs found!

AT5G60900 (RLK1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation