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  5. AT5G60520

AT5G60520


Description : Late embryogenesis abundant (LEA) protein-related


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60520
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g27649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52912.t1 Aspi01Gene52912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59477.t1 Aspi01Gene59477 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000108 No alias not classified & original description: CDS=110-1192 0.03 OrthoFinder output from all 47 species
Ceric.10G068800.1 Ceric.10G068800 not classified & original description: pacid=50613531... 0.03 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.04 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.04 OrthoFinder output from all 47 species
Dcu_g29247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005843001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01005845001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_08582 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_15126 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g22428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428258g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_558137g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_63925g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6494080g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6771381g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7605738g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8427244g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8955g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_957739g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g03490.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g11810.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mpzg00310.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g23846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g107710.2.1 Solyc01g107710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g107720.3.1 Solyc01g107720 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g034130.2.1 Solyc06g034130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g069280.2.1 Solyc11g069280 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g073140.2.1 Solyc11g073140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g073150.1.1 Solyc11g073150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g37258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e008224_P001 Zm00001e008224 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028269_P001 Zm00001e028269 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004737 pyruvate decarboxylase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0010294 abscisic acid glucosyltransferase activity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 271 327
No external refs found!