Description : AP2/B3-like transcriptional factor family protein
Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G58280 | |
Cluster | HCCA: Cluster_123 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00077p00151100 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00078p00115450 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04057 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g28493 | No alias | REM-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g15351 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g51859 | No alias | REM-type transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Aop_g06897 | No alias | REM-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aop_g22457 | No alias | REM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g25439 | No alias | REM-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aop_g36068 | No alias | REM-type transcription factor & original description: none | 0.14 | OrthoFinder output from all 47 species | |
Aspi01Gene04981.t1 | Aspi01Gene04981 | REM-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Aspi01Gene24779.t1 | Aspi01Gene24779 | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene24780.t1 | Aspi01Gene24780 | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene54333.t1 | Aspi01Gene54333 | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene61918.t1 | Aspi01Gene61918 | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G084400.1 | Ceric.02G084400 | REM-type transcription factor & original description:... | 0.13 | OrthoFinder output from all 47 species | |
Ceric.07G043800.1 | Ceric.07G043800 | REM-type transcription factor & original description:... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.14G017400.1 | Ceric.14G017400 | REM-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.35G050300.1 | Ceric.35G050300 | REM-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g14224 | No alias | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g15058 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g18248 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g41437 | No alias | REM-type transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g43688 | No alias | REM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01007552001 | No alias | B3 domain-containing protein Os01g0905400 OS=Oryza... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01009519001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01024536001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01031761001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.09 | OrthoFinder output from all 47 species | |
Gb_07025 | No alias | transcription factor (REM) | 0.04 | OrthoFinder output from all 47 species | |
Gb_35990 | No alias | transcription factor (REM) | 0.11 | OrthoFinder output from all 47 species | |
LOC_Os03g08620.1 | LOC_Os03g08620 | transcription factor (REM) | 0.14 | OrthoFinder output from all 47 species | |
Len_g01795 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g55690 | No alias | REM-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Len_g56640 | No alias | REM-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g28691 | No alias | REM-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g29370 | No alias | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10433064g0010 | No alias | transcription factor (REM) | 0.06 | OrthoFinder output from all 47 species | |
MA_175090g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_430451g0010 | No alias | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
Mp2g08790.1 | No alias | transcription factor (REM) | 0.12 | OrthoFinder output from all 47 species | |
Msp_g36795 | No alias | REM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g08674 | No alias | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g34487 | No alias | REM-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g39771 | No alias | REM-type transcription factor & original description: none | 0.14 | OrthoFinder output from all 47 species | |
Ore_g28568 | No alias | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c2_5990V3.1 | Pp3c2_5990 | AP2/B3-like transcriptional factor family protein | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g01929 | No alias | REM-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g11582 | No alias | REM-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g11583 | No alias | REM-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g14471 | No alias | REM-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0010.g004736 | No alias | REM-type transcription factor & original description: CDS=35-988 | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0085.g018379 | No alias | REM-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g14184 | No alias | REM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g48173 | No alias | REM-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Solyc04g079130.2.1 | Solyc04g079130 | transcription factor (REM) | 0.13 | OrthoFinder output from all 47 species | |
Solyc06g007530.2.1 | Solyc06g007530 | transcription factor (REM) | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g034140.3.1 | Solyc06g034140 | transcription factor (REM) | 0.08 | OrthoFinder output from all 47 species | |
Spa_g03459 | No alias | REM-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Spa_g49592 | No alias | REM-type transcription factor & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Spa_g56976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g00720 | No alias | REM-type transcription factor & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Tin_g11017 | No alias | REM-type transcription factor & original description: none | 0.13 | OrthoFinder output from all 47 species | |
Tin_g29854 | No alias | REM-type transcription factor & original description: none | 0.12 | OrthoFinder output from all 47 species | |
Tin_g32723 | No alias | REM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000624_P003 | Zm00001e000624 | transcription factor (REM) | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e018925_P002 | Zm00001e018925 | B3 domain-containing protein Os01g0905400 OS=Oryza... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e020584_P001 | Zm00001e020584 | transcription factor (REM) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e021364_P001 | Zm00001e021364 | B3 domain-containing protein Os11g0197600 OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040028_P004 | Zm00001e040028 | transcription factor (REM) | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
BP | GO:0000280 | nuclear division | IEP | HCCA |
BP | GO:0000910 | cytokinesis | IEP | HCCA |
BP | GO:0000911 | cytokinesis by cell plate formation | IEP | HCCA |
BP | GO:0001708 | cell fate specification | IEP | HCCA |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | HCCA |
BP | GO:0001933 | negative regulation of protein phosphorylation | IEP | HCCA |
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
MF | GO:0004860 | protein kinase inhibitor activity | IEP | HCCA |
MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
CC | GO:0005911 | cell-cell junction | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006469 | negative regulation of protein kinase activity | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007051 | spindle organization | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | HCCA |
BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | HCCA |
BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | HCCA |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
CC | GO:0009506 | plasmodesma | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | HCCA |
BP | GO:0010440 | stomatal lineage progression | IEP | HCCA |
BP | GO:0010563 | negative regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
BP | GO:0016458 | obsolete gene silencing | IEP | HCCA |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | HCCA |
BP | GO:0016569 | obsolete covalent chromatin modification | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
MF | GO:0019210 | kinase inhibitor activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0030054 | cell junction | IEP | HCCA |
MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | HCCA |
MF | GO:0030332 | cyclin binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0031048 | RNA-mediated heterochromatin formation | IEP | HCCA |
BP | GO:0031400 | negative regulation of protein modification process | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033673 | negative regulation of kinase activity | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0035173 | histone kinase activity | IEP | HCCA |
MF | GO:0035184 | histone threonine kinase activity | IEP | HCCA |
MF | GO:0035402 | histone H3T11 kinase activity | IEP | HCCA |
BP | GO:0035407 | obsolete histone H3-T11 phosphorylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0042023 | DNA endoreduplication | IEP | HCCA |
BP | GO:0042325 | regulation of phosphorylation | IEP | HCCA |
BP | GO:0042326 | negative regulation of phosphorylation | IEP | HCCA |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0043549 | regulation of kinase activity | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044786 | cell cycle DNA replication | IEP | HCCA |
BP | GO:0045736 | negative regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0045859 | regulation of protein kinase activity | IEP | HCCA |
BP | GO:0045936 | negative regulation of phosphate metabolic process | IEP | HCCA |
CC | GO:0046658 | obsolete anchored component of plasma membrane | IEP | HCCA |
BP | GO:0048285 | organelle fission | IEP | HCCA |
BP | GO:0048449 | floral organ formation | IEP | HCCA |
BP | GO:0048451 | petal formation | IEP | HCCA |
BP | GO:0048453 | sepal formation | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0048869 | cellular developmental process | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0051225 | spindle assembly | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
BP | GO:0051348 | negative regulation of transferase activity | IEP | HCCA |
BP | GO:0051567 | histone H3-K9 methylation | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0061647 | histone H3-K9 modification | IEP | HCCA |
CC | GO:0070161 | anchoring junction | IEP | HCCA |
BP | GO:0070925 | organelle assembly | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0071901 | negative regulation of protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0072354 | histone H3T3 kinase activity | IEP | HCCA |
BP | GO:0072355 | obsolete histone H3-T3 phosphorylation | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | HCCA |
BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | HCCA |
BP | GO:1904030 | negative regulation of cyclin-dependent protein kinase activity | IEP | HCCA |
BP | GO:1905393 | plant organ formation | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 127 | 215 |
No external refs found! |