AT5G57180 (CIA2)

Aliases : CIA2

Description : chloroplast import apparatus 2

Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57180

Target	Alias	Description	ECC score	Gene Family Method
Adi_g075719	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g34755	No alias	CMF transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08686	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09765	No alias	CMF transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g13442	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g20220	No alias	BBX class-III transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.16G076600.1	Ceric.16G076600	not classified & original description: pacid=50589566...	0.04	OrthoFinder output from all 47 species
Dac_g09127	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g12679	No alias	CMF transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01024661001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Lfl_g17180	No alias	CMF transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g14113	No alias	BBX class-III transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g24194	No alias	CMF transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16447	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g28029	No alias	BBX class-III transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15539	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19039	No alias	BBX class-III transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18432	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452	No alias	BBX class-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e005433_P002	Zm00001e005433	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Zm00001e030952_P002	Zm00001e030952	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Zm00001e036760_P001	Zm00001e036760	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045036	protein targeting to chloroplast	IMP	Interproscan
BP	GO:0045036	protein targeting to chloroplast	RCA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072596	establishment of protein localization to chloroplast	None	Extended
BP	GO:0072598	protein localization to chloroplast	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	383	419

External Links

No external refs found!

AT5G57180 (CIA2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation