Aliases : THO3, TEX1, AtTEX1
Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG0006540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006540_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G56130 | |
Cluster | HCCA: Cluster_77 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sam_g07535 | No alias | component *(THOC3/Tex1) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | ISS | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0010267 | ta-siRNA processing | IMP | Interproscan |
BP | GO:0031047 | RNA-mediated gene silencing | IMP | Interproscan |
CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000338 | protein deneddylation | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004844 | uracil DNA N-glycosylase activity | IEP | HCCA |
CC | GO:0005635 | nuclear envelope | IEP | HCCA |
CC | GO:0005759 | mitochondrial matrix | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006626 | protein targeting to mitochondrion | IEP | HCCA |
BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
CC | GO:0008180 | COP9 signalosome | IEP | HCCA |
MF | GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | IEP | HCCA |
CC | GO:0009527 | plastid outer membrane | IEP | HCCA |
CC | GO:0009707 | chloroplast outer membrane | IEP | HCCA |
BP | GO:0010387 | COP9 signalosome assembly | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0033477 | S-methylmethionine metabolic process | IEP | HCCA |
BP | GO:0033528 | S-methylmethionine cycle | IEP | HCCA |
CC | GO:0043233 | organelle lumen | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048445 | carpel morphogenesis | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
MF | GO:0097506 | deaminated base DNA N-glycosylase activity | IEP | HCCA |
No external refs found! |