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  5. AT5G55940

AT5G55940 (emb2731)


Aliases : emb2731

Description : Uncharacterised protein family (UPF0172)


Gene families : OG0006043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55940

Target Alias Description ECC score Gene Family Method Actions
Adi_g085750 emb2731 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06339 emb2731 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre05.g240550 No alias ER membrane protein complex subunit 8/9 homolog... 0.05 OrthoFinder output from all 47 species
LOC_Os04g20230.1 emb2731, LOC_Os04g20230 ER membrane protein complex subunit 8/9 homolog... 0.03 OrthoFinder output from all 47 species
Len_g18421 emb2731 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00391 emb2731 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_959794g0010 emb2731 ER membrane protein complex subunit 8/9 homolog... 0.04 OrthoFinder output from all 47 species
Mp1g22620.1 emb2731 ER membrane protein complex subunit 8/9 homolog... 0.02 OrthoFinder output from all 47 species
Smo73953 emb2731 ER membrane protein complex subunit 8/9 homolog... 0.03 OrthoFinder output from all 47 species
Solyc07g009160.3.1 emb2731, Solyc07g009160 ER membrane protein complex subunit 8/9 homolog... 0.07 OrthoFinder output from all 47 species
Solyc10g005780.3.1 emb2731, Solyc10g005780 ER membrane protein complex subunit 8/9 homolog... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
CC GO:0005731 nucleolus organizer region IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
CC GO:0010370 perinucleolar chromocenter IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030874 nucleolar chromatin IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005366 EMC8/9 10 206
No external refs found!