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  5. AT5G55580

AT5G55580


Description : Mitochondrial transcription termination factor family protein


Gene families : OG0007385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55580

Target Alias Description ECC score Gene Family Method Actions
Als_g10518 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11871 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.05 OrthoFinder output from all 47 species
Dde_g08858 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01037780001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
LOC_Os07g39430.1 LOC_Os07g39430 transcription factor (mTERF) 0.08 OrthoFinder output from all 47 species
Len_g19721 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Mp2g14110.1 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Nbi_g12364 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.04 OrthoFinder output from all 47 species
Solyc12g015640.2.1 Solyc12g015640 transcription factor (mTERF) 0.08 OrthoFinder output from all 47 species
Tin_g09512 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010645_P002 Zm00001e010645 transcription factor (mTERF) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004072 aspartate kinase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004412 homoserine dehydrogenase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006264 mitochondrial DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019202 amino acid kinase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032042 mitochondrial DNA metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033258 plastid DNA metabolic process IEP HCCA
BP GO:0033259 plastid DNA replication IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 169 464
No external refs found!