AT5G55080 (RAN4, AtRAN4)

Aliases : RAN4, AtRAN4

Description : ras-related nuclear protein 4

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G55080
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
Aop_g02749	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g08488	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os05g49890.1	RAN3, ATRAN3,...	Ran GTPase	0.02	OrthoFinder output from all 47 species
Len_g09877	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11147	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	171

External Links

No external refs found!