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  5. AT5G54530

AT5G54530


Description : Protein of unknown function, DUF538


Gene families : OG0002754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54530

Target Alias Description ECC score Gene Family Method Actions
Aev_g36737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014548001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_22512 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g48626.1 LOC_Os03g48626 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g36410.1 LOC_Os07g36410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434011g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g43582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39358 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo447102 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g007620.3.1 Solyc06g007620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 30 136
No external refs found!