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  5. AT5G52310

AT5G52310 (RD29A, LTI78, COR78, LTI140)


Aliases : RD29A, LTI78, COR78, LTI140

Description : low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)


Gene families : OG0020066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52310
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028976001 No alias Low-temperature-induced 65 kDa protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006970 response to osmotic stress IGI Interproscan
BP GO:0009269 response to desiccation IMP Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0009409 response to cold RCA Interproscan
BP GO:0009414 response to water deprivation IEP Interproscan
BP GO:0009414 response to water deprivation RCA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0009737 response to abscisic acid IEP Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0010150 leaf senescence IMP Interproscan
BP GO:0042538 hyperosmotic salinity response IEP Interproscan
BP GO:0042538 hyperosmotic salinity response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000024 maltose biosynthetic process IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0004310 farnesyl-diphosphate farnesyltransferase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005983 starch catabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006059 hexitol metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019401 alditol biosynthetic process IEP HCCA
BP GO:0019406 hexitol biosynthetic process IEP HCCA
BP GO:0019593 mannitol biosynthetic process IEP HCCA
BP GO:0019594 mannitol metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP HCCA
MF GO:0047274 galactinol-sucrose galactosyltransferase activity IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
MF GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!