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AT5G52020


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00066390 RAP2.11,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AT1G71130 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.03 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g40001 No alias cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ala_g16411 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g05905 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g21941 RAP2.1 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aob_g40604 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38999 ORA47 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05372.t1 DEAR3, Aspi01Gene05372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07643.t1 ORA47, Aspi01Gene07643 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene08500.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17089.t1 Aspi01Gene17089 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17529.t1 RAP2.11, Aspi01Gene17529 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21527.t1 WIN1, SHN1,... subgroup ERF-V transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene23153.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24329.t1 Aspi01Gene24329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29234.t1 Rap2.6L, Aspi01Gene29234 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32071.t1 Aspi01Gene32071 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34481.t1 Aspi01Gene34481 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41926.t1 RAP2.11, Aspi01Gene41926 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47288.t1 Aspi01Gene47288 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52705.t1 DREB26, Aspi01Gene52705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53917.t1 Aspi01Gene53917 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56616.t1 DEAR3, Aspi01Gene56616 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66121.t1 Aspi01Gene66121 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67784.t1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012465 RAP2.1 not classified & original description: CDS=1-1059 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031184 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1062 0.02 OrthoFinder output from all 47 species
Azfi_s0056.g034097 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0182.g056415 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0449.g070711 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G034300.1 RAP2.1, Ceric.05G034300 not classified & original description: pacid=50578765... 0.04 OrthoFinder output from all 47 species
Ceric.08G023300.1 Ceric.08G023300 not classified & original description: pacid=50638876... 0.03 OrthoFinder output from all 47 species
Ceric.12G059400.1 Ceric.12G059400 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ceric.12G059800.1 Ceric.12G059800 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ceric.12G059900.1 Ceric.12G059900 not classified & original description: pacid=50601963... 0.06 OrthoFinder output from all 47 species
Ceric.16G067500.1 tny, Ceric.16G067500 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.30G046300.1 Ceric.30G046300 not classified & original description: pacid=50608225... 0.03 OrthoFinder output from all 47 species
Ceric.30G046400.1 RAP2.1, Ceric.30G046400 not classified & original description: pacid=50608761... 0.04 OrthoFinder output from all 47 species
Dac_g06247 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15023 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g17233 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g37692 No alias subgroup ERF-III transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dac_g37743 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g38440 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40468 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01084 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02579 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Dcu_g05290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05445 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Dcu_g09905 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g15881 PUCHI subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g16085 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g42203 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01884 DEAR2 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Ehy_g27094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01022277001 ABR1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01028316001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031747001 RRTF1 Alpha-amylase type B isozyme OS=Hordeum vulgare 0.04 OrthoFinder output from all 47 species
GSVIVT01032961001 LEP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_03783 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_08437 RAP2.12 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_41020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_41836 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g64260.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.04 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38000.1 HRD, LOC_Os10g38000 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Lfl_g25083 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10266433g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_115502g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_121581g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.03 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_179692g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_2040g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_42369g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_428433g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_47696g0010 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_4929994g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_891091g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.03 OrthoFinder output from all 47 species
MA_957g0010 ERF-1, ATERF-1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9786598g0010 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Msp_g03917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04750 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g09158 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g18832 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g19552 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g21305 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g35440 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g40238 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23750 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23306 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01623 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g21797 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44088 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07678 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g22702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24749 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_33310V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 2 0.02 OrthoFinder output from all 47 species
Ppi_g11128 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002116 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554 tny not classified & original description: CDS=1-1182 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014837 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.07 OrthoFinder output from all 47 species
Solyc03g093560.1.1 Solyc03g093560 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc11g006050.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Spa_g25423 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g39600 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53752 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.03 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e033541_P001 Zm00001e033541 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.03 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription ISS Interproscan
BP GO:0050832 defense response to fungus IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 64 112
No external refs found!