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  5. AT5G51470

AT5G51470


Description : Auxin-responsive GH3 family protein


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G51470
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00234260 GH3.17,... Indole-3-acetic acid-amido synthetase GH3.17... 0.02 OrthoFinder output from all 47 species
AMTR_s00043p00208540 DFL1, GH3.6,... Phytohormones.auxin.conjugation and... 0.07 OrthoFinder output from all 47 species
AMTR_s00045p00199760 GH3.9,... Putative indole-3-acetic acid-amido synthetase GH3.9... 0.02 OrthoFinder output from all 47 species
AT1G28130 GH3.17 Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
AT1G48660 No alias Auxin-responsive GH3 family protein 0.06 OrthoFinder output from all 47 species
AT1G59500 GH3.4 Auxin-responsive GH3 family protein 0.05 OrthoFinder output from all 47 species
AT2G14960 GH3.1 Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
AT2G23170 GH3.3 Auxin-responsive GH3 family protein 0.08 OrthoFinder output from all 47 species
AT2G47750 GH3.9 putative indole-3-acetic acid-amido synthetase GH3.9 0.05 OrthoFinder output from all 47 species
AT4G27260 GH3.5, WES1 Auxin-responsive GH3 family protein 0.05 OrthoFinder output from all 47 species
AT5G13360 No alias Auxin-responsive GH3 family protein 0.07 OrthoFinder output from all 47 species
AT5G54510 DFL1, GH3.6 Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
Ala_g04995 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Ala_g24399 GH3.5, WES1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46633 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00423.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00424.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00425.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00426.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06626.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06627.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06631.t1 GH3.5, WES1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33576.t1 DFL1, GH3.6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G002400.1 DFL1, GH3.6,... not classified & original description: pacid=50620356... 0.03 OrthoFinder output from all 47 species
Ceric.08G060800.1 DFL1, GH3.6,... not classified & original description: pacid=50637832... 0.03 OrthoFinder output from all 47 species
Dac_g13963 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Dac_g20598 GH3.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32800 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34704 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44438 GH3.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46157 DFL1, GH3.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03008 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12600 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g25677 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Dde_g26531 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01027971001 GH3.9 Putative indole-3-acetic acid-amido synthetase GH3.9... 0.05 OrthoFinder output from all 47 species
Gb_00287 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.02 OrthoFinder output from all 47 species
Gb_04369 No alias indole-3-acetic acid-amido synthetase 0.05 OrthoFinder output from all 47 species
Gb_06148 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.03 OrthoFinder output from all 47 species
Gb_33150 No alias Indole-3-acetic acid-amido synthetase GH3.5... 0.02 OrthoFinder output from all 47 species
Gb_36596 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.05 OrthoFinder output from all 47 species
Gb_38023 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.03 OrthoFinder output from all 47 species
Gb_41415 GH3.5, WES1 indole-3-acetic acid-amido synthetase 0.05 OrthoFinder output from all 47 species
LOC_Os01g55940.1 GH3.1, LOC_Os01g55940 indole-3-acetic acid-amido synthetase 0.04 OrthoFinder output from all 47 species
LOC_Os05g42150.1 DFL1, GH3.6,... indole-3-acetic acid-amido synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os11g32510.1 GH3.17, LOC_Os11g32510 Indole-3-acetic acid-amido synthetase GH3.17... 0.09 OrthoFinder output from all 47 species
LOC_Os11g32520.1 GH3.17, LOC_Os11g32520 Probable indole-3-acetic acid-amido synthetase GH3.13... 0.06 OrthoFinder output from all 47 species
Len_g24155 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24156 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100975g0010 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.03 OrthoFinder output from all 47 species
MA_10432413g0020 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.04 OrthoFinder output from all 47 species
MA_10434772g0010 DFL1, GH3.6 indole-3-acetic acid-amido synthetase 0.04 OrthoFinder output from all 47 species
MA_393345g0010 DFL1, GH3.6 Probable indole-3-acetic acid-amido synthetase GH3.1... 0.03 OrthoFinder output from all 47 species
Mp6g07600.1 DFL1, GH3.6 Probable indole-3-acetic acid-amido synthetase GH3.8... 0.02 OrthoFinder output from all 47 species
Msp_g09329 GH3.17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42821 GH3.1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43242 GH3.17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43816 DFL1, GH3.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02305 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13938 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Ore_g11120 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35185 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14022 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g31410 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g064810.1.1 GH3.1, Solyc02g064810 Probable indole-3-acetic acid-amido synthetase GH3.1... 0.02 OrthoFinder output from all 47 species
Solyc02g064830.4.1 GH3.1, Solyc02g064830 indole-3-acetic acid-amido synthetase 0.05 OrthoFinder output from all 47 species
Solyc07g053030.4.1 DFL1, GH3.6,... Indole-3-acetic acid-amido synthetase GH3.6... 0.03 OrthoFinder output from all 47 species
Spa_g06909 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Spa_g16307 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Tin_g07302 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09110 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28439 GH3.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011159_P002 GH3.17, Zm00001e011159 Indole-3-acetic acid-amido synthetase GH3.17... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0009733 response to auxin ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048829 root cap development IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 16 555
No external refs found!