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  5. AT5G50660

AT5G50660


Description : Protein of unknown function (DUF 3339)


Gene families : OG0006289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50660
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00100030 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033068001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g01180.1 LOC_Os01g01180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g01290.1 LOC_Os05g01290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g20290.1 LOC_Os07g20290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436651g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_110257g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g068160.1.1 Solyc02g068160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e021426_P001 Zm00001e021426 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0031225 obsolete anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR021775 DUF3339 1 63
No external refs found!