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AT5G49890 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : chloride channel C


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49890

Target Alias Description ECC score Gene Family Method Actions
AT5G33280 No alias Voltage-gated chloride channel family protein 0.04 OrthoFinder output from all 47 species
Adi_g005492 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Adi_g058458 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Adi_g084261 CLC-A, ATCLC-A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49592 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19325.t1 ATCLC-C, CLC-C,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.33 CLC-D, ATCLC-D Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre09.g404100 CLC-D, ATCLC-D Solute transport.carrier-mediated transport.CLC anion... 0.02 OrthoFinder output from all 47 species
Cre13.g574000 CLC-D, ATCLC-D Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_03967 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Gb_03968 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species
LOC_Os02g35190.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species
Mp1g24100.1 CLC-D, ATCLC-D anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Pnu_g30106 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISS Interproscan
MF GO:0005253 monoatomic anion channel activity ISS Interproscan
CC GO:0005622 intracellular anatomical structure TAS Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0006821 chloride transport ISS Interproscan
CC GO:0009705 plant-type vacuole membrane IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 715 763
IPR001807 Cl-channel_volt-gated 151 567
No external refs found!