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  5. AT5G49710

AT5G49710


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG0001666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49710
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene62902.t2 Aspi01Gene62902 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g49490.1 LOC_Os03g49490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g11280.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g39377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016055_P002 Zm00001e016055 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000215 tRNA 2'-phosphotransferase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP HCCA
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0019798 procollagen-proline dioxygenase activity IEP HCCA
MF GO:0030544 Hsp70 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0031543 peptidyl-proline dioxygenase activity IEP HCCA
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP HCCA
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!