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  5. AT5G48980

AT5G48980


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48980
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G03460 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G10510 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G46050 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.08 OrthoFinder output from all 47 species
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39750 No alias F-box family protein-related 0.09 OrthoFinder output from all 47 species
AT4G39753 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0015386 potassium:proton antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0022821 solute:potassium antiporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 204 230
IPR001810 F-box_dom 34 75
No external refs found!