AT5G47830

Description : unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

Gene families : OG0005425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005425_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47830
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
Dcu_g00321	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009445001	No alias	No description available	0.06	OrthoFinder output from all 47 species
Nbi_g41953	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g04990	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g078600.3.1	Solyc04g078600	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Spa_g10226	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g10227	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006457	protein folding	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0015391	nucleobase:monoatomic cation symporter activity	IEP	HCCA
MF	GO:0016688	L-ascorbate peroxidase activity	IEP	HCCA
BP	GO:0043462	regulation of ATP-dependent activity	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G47830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation