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AT5G46650


Description : RING/U-box superfamily protein


Gene families : OG0022402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0022402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G46650
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Solyc08g005110.1.1 Solyc08g005110 RING-H2-class E3 ligase 0.1 OrthoFinder output from all 47 species
Solyc08g076800.4.1 Solyc08g076800 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 113 157
No external refs found!