AT5G46010

Description : Homeodomain-like superfamily protein

Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G46010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00149750	WOX2,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT2G01500	PFS2, HOS9, WOX6	Homeodomain-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT2G28610	WOX3, PRS1, PRS	Homeodomain-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT2G33880	STIP, HB-3, WOX9	homeobox-3	0.04	OrthoFinder output from all 47 species
AT3G11260	WOX5	WUSCHEL related homeobox 5	0.04	OrthoFinder output from all 47 species
AT3G18010	WOX1	WUSCHEL related homeobox 1	0.04	OrthoFinder output from all 47 species
Adi_g053615	STIP, HB-3, WOX9	WOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g113202	STPL, WOX8	WOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49578.t1	STPL, WOX8,...	WOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene63553.t1	STPL, WOX8,...	WOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G009200.1	STPL, WOX8,...	WOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G012000.1	WUS, PGA6, WUS1,...	WOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g29650	STPL, WOX8	WOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_921642g0010	WOX1	transcription factor (WOX)	0.03	OrthoFinder output from all 47 species
Solyc02g077390.2.1	STIP, HB-3,...	transcription factor (WOX)	0.03	OrthoFinder output from all 47 species
Spa_g29226	STPL, WOX8	WOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e009121_P001	WOX3, PRS1, PRS,...	transcription factor (WOX)	0.03	OrthoFinder output from all 47 species
Zm00001e024169_P001	WOX3, PRS1, PRS,...	transcription factor (WOX)	0.05	OrthoFinder output from all 47 species
Zm00001e024170_P001	Zm00001e024170	WUSCHEL-related homeobox 3B OS=Zea mays...	0.05	OrthoFinder output from all 47 species
Zm00001e028720_P001	WOX5, Zm00001e028720	transcription factor (WOX)	0.03	OrthoFinder output from all 47 species
Zm00001e028776_P002	WOX2, Zm00001e028776	transcription factor (WOX)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	53	110

External Links

No external refs found!

AT5G46010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation