Description : SBP (S-ribonuclease binding protein) family protein
Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g039739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g28857 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g12144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0099.g044160 | No alias | not classified & original description: CDS=454-1641 | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01020407001 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g33030.1 | LOC_Os04g33030 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g34080.1 | LOC_Os11g34080 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
MA_114475g0010 | SBP1 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g00907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g05830 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0095.g019218 | No alias | not classified & original description: CDS=378-1583 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0154.g023588 | SBP1 | not classified & original description: CDS=3746-4861 | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0043067 | regulation of programmed cell death | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | HCCA |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006865 | amino acid transport | IEP | HCCA |
CC | GO:0009532 | plastid stroma | IEP | HCCA |
CC | GO:0009570 | chloroplast stroma | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
BP | GO:0019632 | shikimate metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |