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AT5G45060


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0013887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45060
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT2G17060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.12 OrthoFinder output from all 47 species
AT3G51570 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G45200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G45230 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0019904 protein domain specific binding IEP HCCA
MF GO:0030275 LRR domain binding IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 14 180
IPR011713 Leu-rich_rpt_3 638 657
IPR002182 NB-ARC 212 435
No external refs found!