1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G42760

AT5G42760


Description : Leucine carboxyl methyltransferase


Gene families : OG0004692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42760
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Ala_g12052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00296.t1 Aspi01Gene00296 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03526.t1 Aspi01Gene03526 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0082.g038763 No alias not classified & original description: CDS=469-1770 0.03 OrthoFinder output from all 47 species
Dac_g11888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g56370.1 LOC_Os03g56370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g07318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005846_P001 Zm00001e005846 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008928 mannose-1-phosphate guanylyltransferase (GDP) activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010236 plastoquinone biosynthetic process IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0010471 GDP-galactose:mannose-1-phosphate guanylyltransferase activity IEP HCCA
MF GO:0010472 GDP-galactose:glucose-1-phosphate guanylyltransferase activity IEP HCCA
MF GO:0010473 GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0031304 obsolete intrinsic component of mitochondrial inner membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052482 defense response by cell wall thickening IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052544 defense response by callose deposition in cell wall IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0080046 quercetin 4'-O-glucosyltransferase activity IEP HCCA
MF GO:0080048 GDP-D-glucose phosphorylase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007213 Ppm1/Ppm2/Tcmp 58 240
No external refs found!