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  5. AT5G42620

AT5G42620


Description : metalloendopeptidases;zinc ion binding


Gene families : OG0005017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42620

Target Alias Description ECC score Gene Family Method Actions
Dcu_g39909 No alias M8-class (Leishmanolysin) metalloprotease & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03445 No alias M8-class (Leishmanolysin) metalloprotease & original... 0.04 OrthoFinder output from all 47 species
Spa_g21575 No alias M8-class (Leishmanolysin) metalloprotease & original... 0.03 OrthoFinder output from all 47 species
Tin_g44920 No alias M8-class (Leishmanolysin) metalloprotease & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001577 Peptidase_M8 169 595
IPR013111 EGF_extracell 634 661
No external refs found!