AT5G40770 (ATPHB3, PHB3)

Aliases : ATPHB3, PHB3

Description : prohibitin 3

Gene families : OG0002891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002891_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40770

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00162380	ATPHB3, PHB3,...	Protein degradation.peptidase families.metallopeptidase...	0.12	OrthoFinder output from all 47 species
Ala_g06530	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Ala_g12346	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.05	OrthoFinder output from all 47 species
Als_g59726	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Aop_g06918	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene03284.t1	ATPHB3, PHB3,...	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.05	OrthoFinder output from all 47 species
Cba_g62162	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Ceric.34G044400.1	ATPHB3, PHB3,...	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.09	OrthoFinder output from all 47 species
Cre12.g519350	ATPHB3, PHB3	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Ehy_g00800	PHB4, ATPHB4	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
GSVIVT01001841001	No alias	Prohibitin-3, mitochondrial OS=Arabidopsis thaliana	0.15	OrthoFinder output from all 47 species
Gb_09762	No alias	prohibitin component of FtsH3/10 matrix-AAA protease heterodimers	0.03	OrthoFinder output from all 47 species
Gb_41670	ATPHB3, PHB3	prohibitin component of FtsH3/10 matrix-AAA protease heterodimers	0.03	OrthoFinder output from all 47 species
LOC_Os04g38900.1	ATPHB3, PHB3,...	prohibitin component of FtsH3/10 matrix-AAA protease heterodimers	0.03	OrthoFinder output from all 47 species
Len_g23642	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Lfl_g02715	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Nbi_g09435	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.02	OrthoFinder output from all 47 species
Ore_g30642	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.03	OrthoFinder output from all 47 species
Pir_g01191	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.06	OrthoFinder output from all 47 species
Pp3c23_22260V3.1	PHB4, ATPHB4,...	prohibitin 4	0.02	OrthoFinder output from all 47 species
Sam_g13008	No alias	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.02	OrthoFinder output from all 47 species
Smo163805	ATPHB3, PHB3	Protein degradation.peptidase families.metallopeptidase...	0.1	OrthoFinder output from all 47 species
Solyc11g010190.1.1	ATPHB3, PHB3,...	prohibitin component of FtsH3/10 matrix-AAA protease heterodimers	0.08	OrthoFinder output from all 47 species
Spa_g12804	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.13	OrthoFinder output from all 47 species
Spa_g18847	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.02	OrthoFinder output from all 47 species
Spa_g48452	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.04	OrthoFinder output from all 47 species
Tin_g05866	ATPHB3, PHB3	component of FtsH3/10 matrix-AAA protease heterodimer &...	0.09	OrthoFinder output from all 47 species
Zm00001e041021_P001	ATPHB3, PHB3,...	prohibitin component of FtsH3/10 matrix-AAA protease heterodimers	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IDA	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006626	protein targeting to mitochondrion	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007005	mitochondrion organization	IMP	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IMP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IMP	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
CC	GO:0045271	respiratory chain complex I	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048527	lateral root development	IMP	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051301	cell division	IMP	Interproscan
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071731	response to nitric oxide	IMP	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001107	Band_7	34	214

External Links

No external refs found!

AT5G40770 (ATPHB3, PHB3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation