AT5G40390 (SIP1)

Aliases : SIP1

Description : Raffinose synthase family protein

Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40390
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00147100	SIP1,...	Galactinol--sucrose galactosyltransferase OS=Oryza...	0.04	OrthoFinder output from all 47 species
AMTR_s00021p00147600	SIP1,...	Carbohydrate metabolism.raffinose family oligosaccharide...	0.03	OrthoFinder output from all 47 species
Adi_g011334	SIP2, AtSIP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32731	SIP2, AtSIP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13931	SIP2, AtSIP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g38980	SIP2, AtSIP2	alkaline alpha-galactosidase *(SIP2) & original description: none	0.02	OrthoFinder output from all 47 species
Cre16.g666334	SIP2, AtSIP2	Probable galactinol--sucrose galactosyltransferase 2...	0.02	OrthoFinder output from all 47 species
LOC_Os01g07530.1	SIP1, LOC_Os01g07530	raffinose synthase	0.04	OrthoFinder output from all 47 species
LOC_Os07g10840.1	SIP2, AtSIP2,...	raffinose alpha-galactosidase	0.03	OrthoFinder output from all 47 species
Zm00001e033100_P002	SIP2, AtSIP2,...	raffinose alpha-galactosidase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0005985	sucrose metabolic process	None	Extended
BP	GO:0005986	sucrose biosynthetic process	IMP	Interproscan
BP	GO:0006059	hexitol metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008378	galactosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IMP	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019401	alditol biosynthetic process	None	Extended
BP	GO:0019406	hexitol biosynthetic process	None	Extended
BP	GO:0019593	mannitol biosynthetic process	IMP	Interproscan
BP	GO:0019594	mannitol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046173	polyol biosynthetic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	ISS	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002218	activation of innate immune response	IEP	HCCA
BP	GO:0002253	activation of immune response	IEP	HCCA
BP	GO:0002684	positive regulation of immune system process	IEP	HCCA
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0007602	phototransduction	IEP	HCCA
MF	GO:0008909	isochorismate synthase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009583	detection of light stimulus	IEP	HCCA
BP	GO:0009585	red, far-red light phototransduction	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009861	jasmonic acid and ethylene-dependent systemic resistance	IEP	HCCA
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010046	response to mycotoxin	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0031349	positive regulation of defense response	IEP	HCCA
BP	GO:0032103	positive regulation of response to external stimulus	IEP	HCCA
BP	GO:0032870	cellular response to hormone stimulus	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042371	vitamin K biosynthetic process	IEP	HCCA
BP	GO:0042372	phylloquinone biosynthetic process	IEP	HCCA
BP	GO:0042373	vitamin K metabolic process	IEP	HCCA
BP	GO:0042374	phylloquinone metabolic process	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045089	positive regulation of innate immune response	IEP	HCCA
MF	GO:0050486	intramolecular transferase activity, transferring hydroxy groups	IEP	HCCA
BP	GO:0050778	positive regulation of immune response	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071365	cellular response to auxin stimulus	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071495	cellular response to endogenous stimulus	IEP	HCCA
MF	GO:0080103	4-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
MF	GO:0080107	8-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA
MF	GO:0080123	jasmonate-amino synthetase activity	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
BP	GO:2000030	regulation of response to red or far red light	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008811	Glycosyl_hydrolases_36	22	767

External Links

No external refs found!

AT5G40390 (SIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation