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  5. AT5G39900

AT5G39900


Description : Small GTP-binding protein


Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39900
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cba_g04653 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g00812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo230251 No alias Translation factor GUF1 homolog, mitochondrial... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Interproscan
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000640 EFG_V-like 468 553
IPR000795 T_Tr_GTP-bd_dom 65 247
IPR013842 LepA_CTD 555 661
No external refs found!