Aliases : CDF2
Description : cycling DOF factor 2
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G39660 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g074653 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g16804 | CDF3 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g08332 | CDF2 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g12477 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g57567 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g07633 | CDF2 | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g19391 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g16037 | ADOF2, DOF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_07177 | CDF2 | transcription factor (DOF) | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os01g55340.1 | LOC_Os01g55340 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g55610.1 | ADOF2, DOF2,... | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g03006 | No alias | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10436933g0020 | CDF2 | transcription factor (DOF) | 0.11 | OrthoFinder output from all 47 species | |
MA_123810g0010 | OBP4 | transcription factor (DOF) | 0.07 | OrthoFinder output from all 47 species | |
MA_2430g0010 | CDF3 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Msp_g01078 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03668 | No alias | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g007880.4.1 | CDF1, Solyc05g007880 | Cyclic dof factor 2 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g12133 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007228_P002 | Zm00001e007228 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
BP | GO:0010014 | meristem initiation | IEP | HCCA |
BP | GO:0010071 | root meristem specification | IEP | HCCA |
BP | GO:0010074 | maintenance of meristem identity | IEP | HCCA |
BP | GO:0010078 | maintenance of root meristem identity | IEP | HCCA |
BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | HCCA |
BP | GO:0016032 | viral process | IEP | HCCA |
BP | GO:0019827 | stem cell population maintenance | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
BP | GO:0044000 | movement in host | IEP | HCCA |
BP | GO:0044001 | migration in host | IEP | HCCA |
BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | HCCA |
BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
BP | GO:0046739 | transport of virus in multicellular host | IEP | HCCA |
BP | GO:0046740 | transport of virus in host, cell to cell | IEP | HCCA |
BP | GO:0046794 | transport of virus | IEP | HCCA |
MF | GO:0046982 | protein heterodimerization activity | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0048364 | root development | IEP | HCCA |
BP | GO:0051701 | biological process involved in interaction with host | IEP | HCCA |
BP | GO:0080022 | primary root development | IEP | HCCA |
BP | GO:0090421 | embryonic meristem initiation | IEP | HCCA |
BP | GO:0098727 | maintenance of cell number | IEP | HCCA |
BP | GO:0099402 | plant organ development | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 136 | 192 |
No external refs found! |