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  5. AT5G38490

AT5G38490


Description : Domain of unknown function (DUF313)


Gene families : OG0011613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011613_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38490
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT1G32030 No alias Domain of unknown function (DUF313) 0.05 OrthoFinder output from all 47 species
AT2G18810 No alias Domain of unknown function (DUF313) 0.02 OrthoFinder output from all 47 species
AT3G49610 No alias Domain of unknown function (DUF313) 0.04 OrthoFinder output from all 47 species
Solyc01g095880.1.1 Solyc01g095880 transcription factor (REM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033558 protein lysine deacetylase activity IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005508 At2g31720-like 216 336
No external refs found!