Heatmap: Cluster_1 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G02050 (LAP6)
-1.75 0.18 -1.02 -1.99 -0.94 -2.73 -1.74 -5.76 -5.96 -6.95 -6.4 -4.65 -6.79 -1.3 -1.29 -1.7 -2.1 -3.1 5.02 0.32 -2.46 -1.46 -1.27 -1.84 -2.28 -2.0 -3.39 -0.78 -1.89 -2.0 -1.14 -1.65 -1.52 -1.71 -1.19 -2.58 -1.05 -1.16 -0.91 -4.22 -5.25 -3.26 -2.06 0.43 -1.83 - -0.69 -1.11
-0.04 -2.27 0.67 0.07 0.67 - -0.81 -4.27 - -2.41 - -0.29 -1.43 -4.07 - - - -4.19 4.75 -2.73 -2.97 -1.49 -2.71 -3.98 -1.51 -3.82 -3.61 -2.62 1.25 0.09 -3.17 -3.78 -2.43 -2.14 -5.28 -3.74 -0.27 -3.58 -1.42 2.46 -3.31 -1.15 -3.65 -3.06 - - -1.9 -4.74
1.39 -1.09 3.85 1.12 2.94 - 2.7 - - -0.03 -2.03 - - - - - - - 3.22 -1.58 - - - -2.14 - - -1.34 - -0.19 - -3.84 - - - -5.78 - -1.64 -4.99 -3.51 - - - - -0.79 -1.38 - -4.07 -2.6
1.28 -2.44 3.4 2.43 2.01 0.87 2.14 1.66 -0.79 -1.02 -3.08 -3.0 1.66 -4.72 -2.84 -5.93 -4.99 - 2.32 -1.47 - -4.86 -4.93 -1.16 -3.28 -4.0 - -0.71 -0.2 -2.38 -3.15 -1.83 -4.04 -6.9 -1.36 - -5.08 -2.0 -5.74 -3.23 - - -1.83 0.08 -1.36 - - -0.7
- -3.06 4.66 0.19 2.59 - 2.01 - - -1.27 - -0.31 - - - - - - 3.19 - - - - -6.3 - - - - -2.04 - - -1.98 - - -4.63 - - -5.33 - - - - - - - - -0.93 -
-5.35 -4.24 -0.54 -5.54 1.4 -0.04 -3.87 -6.05 - -3.91 - - - -4.02 - -4.66 -3.73 -3.29 5.37 -3.36 -4.07 -4.04 -5.46 -5.31 -4.26 -5.04 -3.9 -4.41 -2.31 -3.42 - -5.2 -3.47 -2.93 -5.32 -5.53 -2.97 -4.81 -2.96 - - -3.53 -2.46 -4.86 -2.12 - - -5.54
-0.56 -5.17 2.71 2.97 1.57 -3.98 3.76 - -1.84 -1.4 - - - -4.08 - -4.52 - - 3.82 -3.32 - -2.85 - -4.16 - -5.63 -0.37 - -4.88 - - -4.31 - - -6.76 - - -7.56 -3.92 - - - - - -1.83 - - -
-1.87 -3.45 3.4 -0.28 3.54 -2.77 0.74 - - 0.31 - - -0.34 - - -3.54 - - 4.24 -2.08 - -0.71 - -1.81 - -2.4 - - - - - -2.91 - -4.37 -4.75 -2.3 - -4.43 -5.13 - - - - - - - - -
- - 3.87 1.98 3.58 -0.33 2.57 - - 0.34 - - - - - - -1.93 - 3.07 -2.97 - - - -3.63 - -2.96 - - -2.27 - - - - - - - -2.02 -6.18 - - - - - - - - - -
- - 3.45 3.12 2.72 -1.21 2.99 - - -0.25 - - 0.15 - - - - - 3.5 -3.49 - - - - -3.72 - - - - - - - - - - - - - - - - - - - - - - -
-4.36 -4.08 3.62 2.09 3.52 1.72 1.97 - - -3.19 -1.9 -1.02 - -2.31 - -3.09 - - 2.34 -2.63 -1.21 - - -3.8 -2.26 - - - 0.15 - 0.36 -3.05 -2.69 -1.63 - - -2.02 -1.4 -5.49 - - 0.73 - - -1.76 - - -
-5.08 -5.24 3.37 2.16 3.63 -1.42 2.72 -1.53 - - - - - -3.74 -0.91 - - - 3.3 -2.85 - -2.42 - -3.92 -2.25 -4.02 - - -1.27 - -3.01 -3.99 -1.83 -4.23 -2.45 -0.49 -1.16 -5.31 - - - - - - - - - -
AT1G62940 (ACOS5)
- -9.01 -2.48 -3.34 -3.81 - -4.16 - - -9.41 - - - - - -5.56 -8.97 -7.0 5.56 -3.53 -7.44 -4.32 -6.85 -6.0 -4.64 -7.44 -9.02 - -8.01 -7.87 -8.14 -5.94 -9.99 -7.19 -6.94 - -5.58 -8.07 - - - - -6.82 -6.22 -2.78 - - -5.55
0.81 -0.98 2.64 2.83 1.9 -4.43 2.96 -1.64 -3.42 -0.55 -0.87 2.96 0.68 -3.94 -1.98 -4.02 - - 2.83 -2.47 -1.41 -3.48 - -4.16 -4.46 -5.14 - -2.93 -3.09 - -3.15 -3.73 -5.11 - -3.62 - -4.22 -3.66 -5.6 - - - - -0.57 - - - -3.13
- - 4.03 2.43 2.52 -1.26 3.04 - -1.12 -2.13 - - - - - - - - 3.44 -3.76 - - - - - - - - -1.58 - - - - - - - - -5.13 - - - - - - - - - -
-1.71 -0.79 0.38 1.54 1.66 2.06 1.94 -1.55 -1.67 -4.24 -3.4 -7.79 - -0.86 -0.14 -0.11 -1.84 -1.52 4.21 -0.9 -1.63 -0.04 0.12 -0.69 -3.99 -0.19 -2.04 -1.7 -3.1 -5.49 -1.89 -1.69 -1.65 -2.07 -1.97 -0.65 -1.15 -1.03 -2.47 -2.49 -4.51 -1.39 -3.0 -5.0 -1.87 - - -3.23
AT1G69500 (CYP704B1)
-12.34 -7.38 -5.92 -8.27 -5.17 - -7.2 - - -7.52 - - - -3.85 -0.51 -2.27 -4.79 -8.56 5.5 -2.32 -2.79 0.07 - -6.98 -4.62 -7.53 - - - -9.04 -7.88 -6.03 -7.84 -8.38 -7.95 - -5.34 -7.41 -6.37 - - -5.25 -8.16 - -5.15 - - -
- - 3.37 1.79 2.44 - 3.58 - - -1.59 -0.85 - - -4.88 - - -3.33 - 3.86 -3.42 - -3.56 - -3.84 -3.54 -5.13 - - -1.2 - - - -3.95 - - - - -6.16 - -1.35 - - - - - - - -
- -3.9 3.68 1.42 2.9 - 2.29 - - -0.14 - -2.41 1.48 - -0.5 - - - 3.8 -3.6 - -1.53 - - - -3.72 - - -0.96 - - - - - - - - -5.65 - - - - - -0.9 - - - -
-1.89 -3.34 2.62 -0.51 2.12 -0.55 2.71 - 0.17 -1.1 -1.64 -2.92 - - - - - - 4.68 -2.15 - -2.03 - -2.63 - - - - -1.84 -2.28 - -3.07 - - - - -2.25 -6.4 -5.68 - - - - - - - - -
- - 3.05 -2.52 2.54 -2.96 -0.86 -0.87 - -0.42 - 3.4 -2.18 - - - - - 4.31 -2.74 - - - -3.69 -2.89 -4.57 - - -0.51 - -4.94 -4.49 - - - - - -5.82 - - - - - - - - - -
- - 2.13 2.89 2.05 - 3.11 - - -1.61 - -0.29 - - - - - - 4.41 -3.84 - -2.21 - -2.95 - - - - -0.81 -3.57 - - - - -6.09 - - -6.12 - - - - - - - - - -
- -4.15 3.12 2.12 1.16 -0.73 2.99 - - -0.21 - - - - - - - - 4.25 -3.93 - - - -2.73 -0.86 - - - 1.61 - -1.88 -2.45 - - - - - - - - - - - - - - - -
0.61 - 2.16 2.72 1.47 1.11 3.66 - - 0.03 - -0.21 - -0.82 - - - - 3.84 -4.55 - - - - - - - - -0.13 - - -3.58 - - - - - -5.15 - - - - - - - - - -
- -5.66 3.13 -0.06 2.34 -2.88 -2.36 - - 0.99 -2.44 - 3.63 -3.12 - -3.41 - - 3.99 -3.26 - - - -3.57 -2.81 -4.48 - - 0.48 - - - -4.25 - - - -2.57 -6.64 - - - - - - -2.31 - - -
- - 3.83 2.2 - - 1.43 - - -1.53 - 0.27 - - 0.88 - - - 4.44 -1.86 - - -0.21 -5.7 - - - - - - - - - - - - - - -2.39 - - - - - - - - -
- -2.21 3.3 -1.38 1.99 - -0.83 -2.01 0.74 -1.23 - -1.83 - - - - 0.04 - 4.04 -2.02 - - - - - - - - -0.79 - - - - - -2.08 - - - - 3.58 - - - - - - - -
- -1.83 4.14 2.33 3.33 -0.59 2.32 - - -0.8 - - -2.9 - - - - - 2.86 -3.77 - - - -4.9 -2.62 - - - -0.11 - - - - - - - -2.38 - - - - - - - - - - -
-1.51 1.53 -1.15 -1.27 -0.16 -0.51 -0.87 -1.47 -1.49 -0.84 -1.45 -4.3 -0.76 0.51 -0.29 0.63 -0.08 -0.92 2.29 1.5 -0.12 0.86 0.63 -0.52 -1.37 -0.0 -1.08 0.61 -1.55 -1.37 -0.14 -0.05 0.34 0.3 -0.21 0.38 -0.16 0.62 0.0 -4.13 -5.46 -0.53 0.08 1.03 -1.58 -4.46 1.17 -0.12
- -4.34 2.61 1.52 2.37 -1.84 2.08 -1.6 -0.57 -0.63 0.86 3.9 -0.38 -4.11 - - -3.58 - 3.02 -3.06 - - - -4.67 - -5.38 -3.51 - -2.19 -5.18 - -0.49 -3.1 - -5.53 - -2.41 -6.19 -3.56 -2.19 - - - - - - - -
- -5.4 3.78 2.52 3.21 -1.25 3.01 - - -1.21 - - -1.84 - - - - - 3.23 -3.67 - -3.57 - - - -5.28 - - -2.98 - -4.01 -5.14 - - - - - -6.61 - - - - - - -2.04 - - -
AT3G13220 (WBC27)
-2.06 -6.9 -5.67 -4.8 -6.02 -6.69 -3.11 - - -6.17 - -8.2 - -8.39 - -4.85 - -7.11 5.54 -3.0 - -3.85 -5.75 -5.52 -4.82 -7.9 -7.67 -7.68 -5.32 -5.88 -9.25 -6.24 - -9.85 -7.75 -7.78 -6.97 -8.91 -10.14 -3.8 -6.37 - - - -3.31 -1.61 - -
- -2.96 3.51 2.16 3.21 -0.24 1.71 - -2.87 -1.56 - -2.5 - -4.29 - -2.78 - -1.37 3.13 -3.28 - - -0.91 -1.18 - - - 0.9 1.98 - - - -3.6 -4.79 -3.98 - - -2.88 - - - - -1.46 -0.28 -2.46 - - -3.55
AT3G56530 (NAC064)
- -2.23 3.95 2.36 2.05 - 2.99 - - -2.31 - - - - - - - - 2.9 -2.06 - - - -2.03 - - - - 2.65 - - - - - - - - -4.42 - - - - - - -0.88 - -4.28 -
-1.07 - 2.27 1.36 1.33 -0.82 1.76 - - - - - - -4.29 -1.75 - - - 3.42 -3.95 - -3.26 - - - - - - -2.13 - - -2.23 - -3.73 -2.68 - - -2.11 - - 4.26 - - 0.85 -1.73 - - -1.85
-4.89 -4.06 -3.1 -5.32 0.42 0.58 -5.32 -1.55 -5.74 -4.96 -5.57 -6.97 0.48 -3.99 -4.08 -3.46 -7.03 - 5.34 -3.57 -8.08 -3.55 -4.02 -4.59 -5.34 -5.57 -5.83 -4.38 -6.12 -5.74 -6.61 -5.24 -4.27 -5.89 -7.35 -5.37 -5.44 -5.34 -4.6 -1.47 0.45 -5.96 -7.89 - -4.16 -5.53 - -
-1.63 -3.43 3.92 2.73 3.28 - 2.67 - 0.06 -2.5 - -1.82 -1.86 - - - - - 2.62 -2.36 - - - -3.44 - - - - 0.61 - - - - - - - - -5.97 - - - - - - - - - -
- - 4.24 2.19 3.77 - 2.01 - - -0.46 - - - - - - - - 2.59 -4.97 - - - -3.89 - - - - - - - - - - - - - -5.71 - - - - - - - - - -
- -5.22 3.33 2.5 2.14 - 3.27 - - -1.49 -1.58 2.43 0.09 - - - - - 3.38 -4.57 - - - -3.59 - -3.67 -1.64 - -2.87 - - - - - - - - -5.99 - - - - - - - - - -
- - 1.98 3.78 2.65 0.04 3.94 - - -0.24 -0.53 - - - - - - - 2.41 - - - - - - - - - - - - - - - - - - -4.9 - - - - - - -0.39 - - -
- - 3.99 2.07 2.64 - 3.22 -1.61 - -1.44 - - - - - - - - 3.19 -2.17 - -0.05 - -0.73 - -3.23 - - -2.52 -1.88 -3.55 -3.1 - - - - - -5.26 - - - - - - - - - -
- - - - - -3.16 - - - - - -5.08 - - - -5.48 - - 5.57 -3.98 - - - - -3.88 - - - -5.81 - - -6.01 -6.32 - -6.36 - -4.64 -8.57 - - - - - - -4.37 - - -
- -4.8 3.76 1.97 3.23 -0.78 3.0 -2.02 - -1.53 -3.4 -0.01 -0.65 - -1.28 -3.27 - - 2.99 -4.68 - - - -2.46 -3.76 -3.46 - - 0.36 - - - - - - - -3.24 - - - - - - - - - -8.22 -
-4.48 0.58 -3.68 -5.54 -3.53 - -5.47 - - -7.86 - - - -0.48 -2.12 -2.39 -5.01 -5.39 4.07 0.82 -4.21 0.44 1.42 -1.7 -4.09 -2.11 - 1.21 -3.51 -5.72 -0.55 -1.25 -1.79 -2.79 0.37 -1.19 -4.05 -0.03 -4.13 - - -1.35 1.08 0.5 -0.72 3.05 0.36 -0.11
AT4G20900 (MS5)
0.51 -1.36 3.11 2.8 3.16 -1.51 2.47 -2.11 0.22 0.54 0.2 -2.46 -0.64 -3.05 -3.41 -3.48 -3.06 -3.94 1.3 -1.35 - -3.33 -2.09 -2.3 - -2.89 -2.61 0.22 0.72 -4.26 -2.75 -5.38 -2.88 -3.96 -2.23 -2.16 -0.4 -3.2 -6.26 -0.02 - - -2.84 -2.23 - -0.25 - -4.55
- -8.0 1.09 1.72 0.62 -2.39 2.21 - - -5.01 - -2.94 - - - -5.51 - - 5.16 -4.2 - - - -5.75 -4.9 -4.99 - - -3.52 - - - - - -6.66 - - -5.65 - - - - - - -4.4 - - -
AT4G34850 (LAP5)
-2.9 -3.91 -4.48 -3.16 -3.63 -2.77 -4.02 - - -7.98 -6.35 -10.57 - -5.02 -4.76 -5.18 -6.17 -6.05 5.53 -3.45 -6.65 -3.75 -4.3 -4.95 -4.2 -4.69 -6.7 -3.71 -6.49 -4.75 -3.99 -4.62 -5.67 -4.7 -6.11 -5.6 -4.12 -5.47 -6.11 -7.38 - -7.42 -4.53 -6.74 -3.24 - - -4.74
AT4G35420 (DRL1)
0.47 0.47 -1.44 -3.52 -1.82 -4.03 -3.52 -4.03 -8.0 -6.58 -8.71 -5.86 - -0.07 -1.26 -0.87 -1.98 -2.91 4.89 0.26 -0.16 -0.5 -0.87 -1.3 -3.29 -0.61 -1.88 -0.86 -1.5 -3.4 -1.2 -1.46 -1.3 -1.07 -1.8 -1.16 -1.17 -0.84 -0.33 -0.89 -4.74 0.08 -2.17 -2.71 -2.53 - - -4.54
-10.07 -2.57 - - - - - - - - - - - -3.75 -1.01 -0.44 -1.61 -1.74 4.11 -0.8 3.62 1.3 0.04 -2.63 -5.4 -4.67 - -4.87 -6.32 - -3.13 -0.63 -1.6 -0.18 -1.37 2.51 -5.58 -1.82 -3.47 - - 0.26 -3.32 - 1.2 - -12.42 -
- -1.79 4.25 2.24 3.24 -0.17 1.16 -2.59 - -2.64 - - - - - - - - 3.24 -1.76 - -2.59 - -4.83 -3.04 - -3.76 -2.52 -2.23 - -4.09 -5.64 -5.47 -4.87 -7.34 - -1.31 -4.52 -5.86 - - - - - - - - -
0.61 -5.21 1.07 1.5 -0.36 -2.19 1.75 1.05 1.4 2.05 0.92 -1.85 3.16 -2.94 -0.1 - - - 3.97 -3.6 - - - -3.39 - -4.59 - - -2.29 - - - - - - - - -6.84 - - - - - - -3.4 - - -
AT5G14300 (PHB5)
- -3.18 1.63 1.69 2.14 - 1.6 -0.42 - - - - 1.69 -1.37 - - - - 4.74 -1.8 - - - - -0.17 - - - -0.25 - - - - - - - -0.08 - -3.2 - - - - - - - - -
-0.8 -1.82 3.69 1.18 1.91 -0.82 2.9 -2.53 - 0.13 - - - - - -1.57 -2.19 - 3.43 -2.81 - -2.42 - -7.5 -2.4 - -2.12 - -0.72 - - - -1.96 - -5.41 -0.4 0.57 -2.71 -1.2 - - 0.01 0.08 - - -0.56 -1.61 -
AT5G35600 (HDA7)
-2.72 -1.49 2.4 3.1 2.12 -3.01 3.35 - - -2.1 -2.68 - - -5.35 - -2.03 -3.71 -1.95 3.29 -1.64 - -4.07 -1.29 -3.61 -0.32 -3.32 - -1.19 1.49 0.87 -4.45 -1.97 -3.89 -3.38 -3.06 -3.62 - -2.19 -6.93 - - - -3.57 -1.96 -3.54 - - -
- 0.49 3.83 1.09 3.36 - 0.63 0.56 0.67 -1.45 - 0.03 -1.85 - - - - - 3.51 -0.09 - - - - - - - - -0.31 - - - - - - - -1.17 -3.91 -3.83 - - - - - - - - -
-0.03 -2.72 3.62 2.64 2.79 -1.58 2.76 -4.9 -1.95 -0.69 -1.82 - -0.9 -5.83 - - - - 3.41 -2.44 - -4.31 -4.38 -4.53 -3.77 - -4.23 -3.24 -0.12 -4.16 -6.74 -6.36 -5.62 - -7.18 -4.36 -4.25 -4.72 -5.1 - - - - - -3.27 - - -3.78
- -5.72 -3.6 -4.6 - -4.88 -5.56 - - -5.43 - - - -4.47 -4.53 -3.34 -5.67 - 5.41 -1.2 - -0.71 -2.77 -3.79 -1.99 -3.98 - - -4.3 -5.05 -6.46 -3.32 -3.48 -5.4 -5.84 -3.59 -2.99 -2.78 -4.84 -3.56 - -0.51 0.06 -3.92 -0.81 - - -2.29
- - 4.31 - 3.8 - - - - 0.85 - - - - - - - - 3.5 - - - - 0.13 - - - - - - - - - - - - - - - - - - - - - - - -
- -3.78 3.86 1.52 3.25 - 2.74 - - -0.95 - - - - - - - - 3.42 -3.27 - -0.92 - -2.76 - - - - - - - - - - - - - -3.96 - - - - - - 1.19 - - -
AT5G56110 (MS188)
-6.42 - - -3.05 - -3.41 -1.26 -0.65 0.4 0.5 1.0 -3.88 -2.8 - - - - - 5.32 -3.34 - -3.46 -2.95 -4.23 -2.43 -5.17 -2.15 - - - - -1.7 -3.98 -3.93 -6.0 - - -5.08 -3.17 - - - - -2.35 -1.94 - - -
-0.59 -5.07 3.43 2.32 2.56 -1.65 2.89 -4.29 - -2.65 -3.82 -3.21 -3.47 - - - - - 4.09 -2.65 - -2.95 - -5.83 - - - - - - - - - - -7.45 - - -8.12 - - - - - - -3.68 - - -
- -4.21 3.55 2.2 2.29 -2.77 2.45 -4.9 - -0.61 - - - - - -3.78 - -3.84 4.29 -2.71 - -3.34 - -4.95 -3.11 -4.89 - - -4.69 -4.59 - - -6.24 - -7.56 - - - -7.78 - - - - - -2.71 - - -
-0.77 -3.88 2.9 2.78 1.84 0.3 3.49 - - -0.66 - - - - - - - - 3.94 -1.83 - - - - -2.86 - - - -1.64 - - - - - -6.91 - - - - - - - - - -2.51 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.