AT5G38140 (NF-YC12)

Aliases : NF-YC12

Description : nuclear factor Y, subunit C12

Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G38140

Target	Alias	Description	ECC score	Gene Family Method
Aev_g06001	HAP5A, NF-YC1, ATHAP5A	component *(NF-YC) of NF-Y transcription factor complex...	0.05	OrthoFinder output from all 47 species
Aspi01Gene61987.t1	HAP5A, NF-YC1,...	component *(NF-YC) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01036760001	NF-YC2, ATHAP5B, HAP5B	Nuclear transcription factor Y subunit C-2...	0.05	OrthoFinder output from all 47 species
Gb_00256	HAP5A, NF-YC1, ATHAP5A	component NF-YC of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
MA_10163039g0010	HAP5A, NF-YC1, ATHAP5A	component NF-YC of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
MA_8756989g0010	NF-YC2, ATHAP5B, HAP5B	component NF-YC of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Pp3c9_5650V3.1	NF-YC2, ATHAP5B,...	nuclear factor Y, subunit C4	0.02	OrthoFinder output from all 47 species
Solyc03g111450.3.1	HAP5A, NF-YC1,...	component NF-YC of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003958	CBFA_NFYB_domain	67	130

External Links

No external refs found!

AT5G38140 (NF-YC12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation