1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G37730

AT5G37730


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0001149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001149_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37730
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00064960 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AMTR_s00130p00015630 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00016510 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00364p00012660 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G23150 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g37027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G061800.1 Ceric.17G061800 not classified & original description: pacid=50617941... 0.02 OrthoFinder output from all 47 species
Ceric.17G062500.1 Ceric.17G062500 not classified & original description: pacid=50618150... 0.02 OrthoFinder output from all 47 species
Dde_g19045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019942001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_07712 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_23758 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36682 No alias Uncharacterized protein At4g22758 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g21920.2 LOC_Os02g21920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g21925.1 LOC_Os02g21925 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g32580.1 LOC_Os02g32580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g04480.1 LOC_Os06g04480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_166968g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g46518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091535.1.1 Solyc02g091535 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g066860.2.1 Solyc11g066860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g14929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
MF GO:0008429 phosphatidylethanolamine binding IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031559 oxidosqualene cyclase activity IEP HCCA
MF GO:0042299 lupeol synthase activity IEP HCCA
MF GO:0042300 beta-amyrin synthase activity IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!