Aliases : ALY4
Description : ALWAYS EARLY 4
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g013543 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0107.g045108 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g462250 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g27518 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05460 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g073280.2.1 | Solyc11g073280 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001243_P001 | Zm00001e001243 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | ISS | Interproscan |
CC | GO:0005730 | nucleolus | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
CC | GO:0005615 | extracellular space | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006625 | protein targeting to peroxisome | IEP | HCCA |
BP | GO:0006626 | protein targeting to mitochondrion | IEP | HCCA |
BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
BP | GO:0006869 | lipid transport | IEP | HCCA |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0007031 | peroxisome organization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009646 | response to absence of light | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010351 | lithium ion transport | IEP | HCCA |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0015450 | protein-transporting ATPase activity | IEP | HCCA |
BP | GO:0015908 | fatty acid transport | IEP | HCCA |
BP | GO:0015919 | peroxisomal membrane transport | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016558 | protein import into peroxisome matrix | IEP | HCCA |
CC | GO:0016604 | nuclear body | IEP | HCCA |
CC | GO:0016607 | nuclear speck | IEP | HCCA |
CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
CC | GO:0035061 | interchromatin granule | IEP | HCCA |
BP | GO:0043574 | peroxisomal transport | IEP | HCCA |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
BP | GO:0072662 | protein localization to peroxisome | IEP | HCCA |
BP | GO:0072663 | establishment of protein localization to peroxisome | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
MF | GO:0120227 | acyl-CoA binding | IEP | HCCA |
MF | GO:0140318 | protein transporter activity | IEP | HCCA |
MF | GO:1901567 | fatty acid derivative binding | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | HCCA |
No external refs found! |