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  5. AT5G28830

AT5G28830


Description : calcium-binding EF hand family protein


Gene families : OG0008137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28830
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Ala_g01096 No alias SCSsister-clade calcium sensor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03028.t1 Aspi01Gene03028 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07434 No alias SCSsister-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z045600.1 Ceric.1Z045600 SCSsister-clade calcium sensor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01021794001 No alias No description available 0.05 OrthoFinder output from all 47 species
Mp8g12640.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g17735 No alias SCSsister-clade calcium sensor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002220 innate immune response activating cell surface receptor signaling pathway IEP HCCA
BP GO:0002221 pattern recognition receptor signaling pathway IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002752 cell surface pattern recognition receptor signaling pathway IEP HCCA
BP GO:0002757 immune response-activating signaling pathway IEP HCCA
BP GO:0002758 innate immune response-activating signaling pathway IEP HCCA
BP GO:0002764 immune response-regulating signaling pathway IEP HCCA
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005355 glucose transmembrane transporter activity IEP HCCA
MF GO:0005356 glucose:proton symporter activity IEP HCCA
MF GO:0005358 high-affinity glucose:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009399 nitrogen fixation IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
MF GO:0009679 hexose:proton symporter activity IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016420 malonyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032490 detection of molecule of bacterial origin IEP HCCA
BP GO:0032491 detection of molecule of fungal origin IEP HCCA
BP GO:0032494 response to peptidoglycan IEP HCCA
BP GO:0032499 detection of peptidoglycan IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0050736 O-malonyltransferase activity IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
MF GO:0070191 methionine-R-sulfoxide reductase activity IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071323 cellular response to chitin IEP HCCA
BP GO:0071417 cellular response to organonitrogen compound IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
MF GO:2001080 chitosan binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!