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AT5G28000


Description : Polyketide cyclase/dehydrase and lipid transport superfamily protein


Gene families : OG0002483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28000
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cba_g30056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g007750.4.1 MLP31, Solyc04g007750 Kirola OS=Actinidia deliciosa (sp|p85524|kiro_actde : 117.0) 0.03 OrthoFinder output from all 47 species
Solyc04g007823.1.1 Solyc04g007823 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g046140.3.1 Solyc05g046140 Kirola OS=Actinidia deliciosa (sp|p85524|kiro_actde : 125.0) 0.03 OrthoFinder output from all 47 species
Solyc10g048030.2.1 Solyc10g048030 Kirola OS=Actinidia deliciosa (sp|p85524|kiro_actde : 93.2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 14 163
No external refs found!